RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 PDE1BQ01064 536 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 GPS1Q13098 491 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 FZD2Q14332 565 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 SUZ12Q15022 739 aaKnown RBP12.43□□□□□ -0.42
TRA2A-209ENST00000494255 PPP1R7Q15435 360 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 TAF1AQ15573 450 aaPredicted RBP12.43□□□□□ -0.42
TRA2A-209ENST00000494255 PRAMEF14Q5SWL7 426 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 ZDHHC20Q5W0Z9 365 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 DENND5AQ6IQ26 1287 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 DNAAF3Q8N9W5 541 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 BRSK1Q8TDC3 778 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 EID2BQ96D98 161 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 DDX47Q9H0S4 455 aaKnown RBP12.43□□□□□ -0.42
TRA2A-209ENST00000494255 EIF2B3Q9NR50 452 aaKnown RBP12.43□□□□□ -0.42
TRA2A-209ENST00000494255 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.42□□□□□ -0.42
TRA2A-209ENST00000494255 H3BM21 787 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 K7ESM1 405 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 AURKAO14965 403 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 STX7O15400 261 aaKnown RBP12.42□□□□□ -0.42
TRA2A-209ENST00000494255 PPFIA2O75334 1257 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 SUN1O94901 812 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 CRTAMO95727 393 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 HOXC4P09017 264 aaPredicted RBP12.42□□□□□ -0.42
TRA2A-209ENST00000494255 LPOP22079 712 aaPredicted RBP12.42□□□□□ -0.42
TRA2A-209ENST00000494255 RXRGP48443 463 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 IL9RQ01113 521 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 CDH17Q12864 832 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 SLC14A1Q13336 389 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 RSPO4Q2I0M5 234 aaPredicted RBP12.42□□□□□ -0.42
TRA2A-209ENST00000494255 HENMT1Q5T8I9 393 aaKnown RBP12.42□□□□□ -0.42
TRA2A-209ENST00000494255 ALS2CLQ60I27 953 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 HEATR4Q86WZ0 1026 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 OR52K1Q8NGK4 314 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 ZNF592Q92610 1267 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 FUBP1Q96AE4 644 aaKnown RBP12.42□□□□□ -0.42
TRA2A-209ENST00000494255 WDR92Q96MX6 357 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 SPATA16Q9BXB7 569 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 BPIFA1Q9NP55 256 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRA2A-209ENST00000494255 NFKBIL1Q9UBC1 381 aaPredicted RBP12.42□□□□□ -0.42
TRA2A-209ENST00000494255 KLQ9UEF7 1012 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 PCYOX1Q9UHG3 505 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 PCDHGB2Q9Y5G2 931 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 SLC30A4O14863 429 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 MYCLP1P12525 358 aaPredicted RBP12.42□□□□□ -0.42
TRA2A-209ENST00000494255 BPIP17213 487 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 HNRNPKP61978 463 aaKnown RBP eCLIP12.42□□□□□ -0.422e-9■□□□□ 9.7
TRA2A-209ENST00000494255 CDK3Q00526 305 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 CDK16Q00536 496 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 PPARDQ03181 441 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 SEPT6Q14141 434 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 INAVAQ3KP66 663 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 TPRG1LQ5T0D9 272 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 ENPP7Q6UWV6 458 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 ADAMTSL4Q6UY14 1074 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 KLHL7Q8IXQ5 586 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 PELI3Q8N2H9 469 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 GPR26Q8NDV2 337 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 HIC2Q96JB3 615 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 PLEKHG4BQ96PX9 1271 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 ZSCAN5AQ9BUG6 496 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 TEX101Q9BY14 249 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 IL17CQ9P0M4 197 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 ARL5AQ9Y689 179 aa12.42□□□□□ -0.42
TRA2A-209ENST00000494255 SCN8AQ9UQD0 1980 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 AP3B1O00203 1094 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 BUD23O43709 281 aaKnown RBP12.41□□□□□ -0.42
TRA2A-209ENST00000494255 PCDHGA12O60330 932 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 RASGRP1O95267 797 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 CSF2P04141 144 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 JUNDP17535 347 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 TPH1P17752 444 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 EPHA8P29322 1005 aaPredicted RBP12.41□□□□□ -0.42
TRA2A-209ENST00000494255 SPAM1P38567 509 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 BLKP51451 505 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 TERF1P54274 439 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 SARNPP82979 210 aaKnown RBP12.41□□□□□ -0.42
TRA2A-209ENST00000494255 EIF2B5Q13144 721 aaKnown RBP12.41□□□□□ -0.42
TRA2A-209ENST00000494255 LAMB3Q13751 1172 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 POU6F1Q14863 301 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 ZNF542PQ5EBM4 170 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 TRAM1L1Q8N609 369 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 OR4K2Q8NGD2 314 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 OR56A4Q8NGH8 313 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 BTN2A2Q8WVV5 523 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 SLCO2A1Q92959 643 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 AGAP2Q99490 1192 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 RTKNQ9BST9 563 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 SLC13A1Q9BZW2 595 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 PIH1D1Q9NWS0 290 aaKnown RBP12.41□□□□□ -0.42
TRA2A-209ENST00000494255 ASIC3Q9UHC3 531 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 MOSPD1Q9UJG1 213 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 PIEZO1Q92508 2521 aa12.41□□□□□ -0.42
TRA2A-209ENST00000494255 MYO15AQ9UKN7 3530 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 GVINP1Q7Z2Y8 2422 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 TNFRSF10CO14798 259 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 INPP4BO15327 924 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 FLRT2O43155 660 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 URI1O94763 535 aaPredicted RBP12.4□□□□□ -0.42
TRA2A-209ENST00000494255 SOD1P00441 154 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms