RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 PRR5-ARHGAP8B1AHC4 643 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 EPN2O95208 641 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 PYGLP06737 847 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 TSHRP16473 764 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 CD38P28907 300 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 HOXD12P35452 270 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 IGFALSP35858 605 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 MAGEA3P43357 314 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 GPR1P46091 355 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 AFF3P51826 1226 aaKnown RBP14.51□□□□□ -0.09
BRCA1-223ENST00000494123 DCDC1P59894 354 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 TUBB4BP68371 445 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 DPTQ07507 201 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 TRADDQ15628 312 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 BBS9Q3SYG4 887 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 FNBP1LQ5T0N5 605 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 ESRP1Q6NXG1 681 aaKnown RBP14.51□□□□□ -0.09
BRCA1-223ENST00000494123 GCNT7Q6ZNI0 430 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 PTAR1Q7Z6K3 402 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-223ENST00000494123 RABEPKQ7Z6M1 372 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 TMEM145Q8NBT3 493 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 GPR26Q8NDV2 337 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 FAM174AQ8TBP5 190 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 PTCD2Q8WV60 388 aaKnown RBP14.51□□□□□ -0.09
BRCA1-223ENST00000494123 IFT81Q8WYA0 676 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 SEC14L1Q92503 715 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 ART4Q93070 314 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 SKA1Q96BD8 255 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 DNAJC1Q96KC8 554 aaKnown RBP14.51□□□□□ -0.09
BRCA1-223ENST00000494123 CHRAC1Q9NRG0 131 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 TMEM74BQ9NUR3 256 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 NLE1Q9NVX2 485 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-223ENST00000494123 PCDHGA5Q9Y5G8 931 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 SLCO1B1Q9Y6L6 691 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 GON4LQ3T8J9 2241 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 GLYATL1P3A0A0U1RQE8 302 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 MAGEB16A2A368 324 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 H0Y8X5 98 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 LMNAP02545 664 aaKnown RBP14.5□□□□□ -0.09
BRCA1-223ENST00000494123 DHX9Q08211 1270 aaKnown RBP14.5□□□□□ -0.09
BRCA1-223ENST00000494123 HLTFQ14527 1009 aaKnown RBP eCLIP14.5□□□□□ -0.09
BRCA1-223ENST00000494123 INPP5AQ14642 412 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 TEAD4Q15561 434 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 TSTD2Q5T7W7 516 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 HENMT1Q5T8I9 393 aaKnown RBP14.5□□□□□ -0.09
BRCA1-223ENST00000494123 ARMC3Q5W041 872 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 PNCKQ6P2M8 343 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 FAM151BQ6UXP7 276 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 IFT20Q8IY31 132 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 MPP5Q8N3R9 675 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 SUMF1Q8NBK3 374 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 PLA2G15Q8NCC3 412 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 FBXO25Q8TCJ0 367 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 PWWP2AQ96N64 755 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 C19orf43Q9BQ61 176 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 ZSCAN5AQ9BUG6 496 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 ARRDC1-AS1Q9H2J1 176 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 MRM3Q9HC36 420 aaKnown RBP14.5□□□□□ -0.09
BRCA1-223ENST00000494123 NFKBIL1Q9UBC1 381 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-223ENST00000494123 FKBPLQ9UIM3 349 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 APPL1Q9UKG1 709 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 SOX13Q9UN79 622 aa14.5□□□□□ -0.09
BRCA1-223ENST00000494123 POM121BA6NF01 834 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 K7ESM1 405 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 TP73O15350 636 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 RETP07949 1114 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 MPLP40238 635 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 RABIFP47224 123 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 C21orf59P57076 290 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 DUOXA1Q1HG43 343 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 KYAT3Q6YP21 454 aaKnown RBP14.49□□□□□ -0.09
BRCA1-223ENST00000494123 CENPUQ71F23 418 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 NLRP8Q86W28 1048 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 TRAM1L1Q8N609 369 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 MFSD2AQ8NA29 543 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 C1orf216Q8TAB5 229 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 CEP76Q8TAP6 659 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 PEX13Q92968 403 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 STAMBPL1Q96FJ0 436 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 KLHDC7BQ96G42 594 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 KIFC1Q9BW19 673 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 WDR26Q9H7D7 661 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 IL26Q9NPH9 171 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 NCDNQ9UBB6 729 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 MTRF1LQ9UGC7 380 aaKnown RBP14.49□□□□□ -0.09
BRCA1-223ENST00000494123 RIMKLBQ9ULI2 386 aa14.49□□□□□ -0.09
BRCA1-223ENST00000494123 ZNF106Q9H2Y7 1883 aaKnown RBP14.49□□□□□ -0.09
BRCA1-223ENST00000494123 CCL22O00626 93 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 TOR1BO14657 336 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 MAGEC1O60732 1142 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 BANF1O75531 89 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 PRAMEF1O95521 474 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 CFIP05156 583 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 THEGLP0DJG4 465 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 CSNK1EP49674 416 aaKnown RBP14.48□□□□□ -0.09
BRCA1-223ENST00000494123 THOP1P52888 689 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 PRAMEP78395 509 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 OVGP1Q12889 678 aa14.48□□□□□ -0.09
BRCA1-223ENST00000494123 PDIA2Q13087 525 aaKnown RBP14.48□□□□□ -0.09
BRCA1-223ENST00000494123 CUL1Q13616 776 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms