RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 CWF19L1Q69YN2 538 aaKnown RBP11.37□□□□□ -0.59
MCF2L-231ENST00000494043 ZNF470Q6ECI4 717 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 RFLNAQ6ZTI6 216 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 KIAA0408Q6ZU52 694 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 PTAR1Q7Z6K3 402 aaPredicted RBP11.37□□□□□ -0.59
MCF2L-231ENST00000494043 CROCCP2Q86T23 111 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 KBTBD6Q86V97 674 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 SLC26A11Q86WA9 606 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 TDRPQ86YL5 185 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 LMNTD2Q8IXW0 634 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 RAVER1Q8IY67 606 aaKnown RBP11.37□□□□□ -0.59
MCF2L-231ENST00000494043 RIBC1Q8N443 379 aaPredicted RBP11.37□□□□□ -0.59
MCF2L-231ENST00000494043 OTUD6BQ8N6M0 293 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 GPR26Q8NDV2 337 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 TSTD1Q8NFU3 115 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 GPR150Q8NGU9 434 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 OR4L1Q8NH43 312 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 CXorf40AQ8TE69 158 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 DCAKDQ8WVC6 231 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 ZBTB9Q96C00 473 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 MRRFQ96E11 262 aaKnown RBP11.37□□□□□ -0.59
MCF2L-231ENST00000494043 SGSM3Q96HU1 749 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 COQ10AQ96MF6 247 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 PLEKHG4BQ96PX9 1271 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 AGAP2Q99490 1192 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 IER2Q9BTL4 223 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 UGT1A7Q9HAW7 530 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 UGT1A10Q9HAW8 530 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 UGT1A8Q9HAW9 530 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 IL26Q9NPH9 171 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 CATSPERZQ9NTU4 200 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 NSMCE4AQ9NXX6 385 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 BCCIPQ9P287 314 aaKnown RBP eCLIP11.37□□□□□ -0.59
MCF2L-231ENST00000494043 MARCH4Q9P2E8 410 aaPredicted RBP11.37□□□□□ -0.59
MCF2L-231ENST00000494043 PSMC3IPQ9P2W1 217 aaPredicted RBP11.37□□□□□ -0.59
MCF2L-231ENST00000494043 APPL1Q9UKG1 709 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 NCKAP1Q9Y2A7 1128 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 FNDC3AQ9Y2H6 1198 aaKnown RBP11.37□□□□□ -0.59
MCF2L-231ENST00000494043 PSAT1Q9Y617 370 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 ZNF106Q9H2Y7 1883 aaKnown RBP11.36□□□□□ -0.59
MCF2L-231ENST00000494043 GLYATL1P3A0A0U1RQE8 302 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 WNT9AO14904 365 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 CD3EAPO15446 510 aaKnown RBP11.36□□□□□ -0.59
MCF2L-231ENST00000494043 MMP20O60882 483 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 SRP72O76094 671 aaKnown RBP11.36□□□□□ -0.59
MCF2L-231ENST00000494043 PRAMEF1O95521 474 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 PDGFBP01127 241 aaPredicted RBP11.36□□□□□ -0.59
MCF2L-231ENST00000494043 DCNP07585 359 aaKnown RBP11.36□□□□□ -0.59
MCF2L-231ENST00000494043 INHBAP08476 426 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 GP5P40197 560 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 SLC1A2P43004 574 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 MAGEA9P43362 315 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 TPMTP51580 245 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 ADPRHP54922 357 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 CACNG1Q06432 222 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 MTAPQ13126 283 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 TYSND1Q2T9J0 566 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 FASTKD1Q53R41 847 aaKnown RBP11.36□□□□□ -0.59
MCF2L-231ENST00000494043 ANO7Q6IWH7 933 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 MRNIPQ6NTE8 343 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 ADGRD1Q6QNK2 874 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 FAM151BQ6UXP7 276 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 PACS1Q6VY07 963 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 Q6ZVL8 140 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 ZNF765Q7L2R6 523 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 CYP2U1Q7Z449 544 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 TECPR1Q7Z6L1 1165 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 CILP2Q8IUL8 1156 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 DENND6AQ8IWF6 608 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 NRSN1Q8IZ57 195 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 C2CD4AQ8NCU7 369 aaPredicted RBP11.36□□□□□ -0.59
MCF2L-231ENST00000494043 OR14C36Q8NHC7 312 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 DTD2Q96FN9 168 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 HHIPQ96QV1 700 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 CPNE1Q99829 537 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 SH3GL2Q99962 352 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 CDH19Q9H159 772 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 PREBQ9HCU5 417 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 CD93Q9NPY3 652 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 EURLQ9NYK6 297 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 USP36Q9P275 1121 aaKnown RBP11.36□□□□□ -0.59
MCF2L-231ENST00000494043 TXNDC16Q9P2K2 825 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 LGALS13Q9UHV8 139 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 CD84Q9UIB8 345 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 ZNF180Q9UJW8 692 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 FBXO5Q9UKT4 447 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 IKBKGQ9Y6K9 419 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 SLC30A1Q9Y6M5 507 aa11.36□□□□□ -0.59
MCF2L-231ENST00000494043 TLDC2A0PJX2 215 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 GOLGA6L10A6NI86 522 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 GOLGA8CPA6NN73 597 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 LZTS3O60299 673 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-231ENST00000494043 OPA1O60313 960 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 FAM155BO75949 473 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 RECQL5O94762 991 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-231ENST00000494043 PCDH8O95206 1070 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 APBB3O95704 486 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 IGLV3-19P01714 112 aa11.35□□□□□ -0.59
MCF2L-231ENST00000494043 F7P08709 466 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-231ENST00000494043 MYZAPP0CAP1 466 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms