RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 PRAMEP78395 509 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 DPTQ07507 201 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 ILF2Q12905 390 aaKnown RBP12.4□□□□□ -0.42
SNX17-208ENST00000493711 BRD3Q15059 726 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 ANGPT1Q15389 498 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 ELF2Q15723 593 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 ZNF284Q2VY69 593 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 ANKRD20A4Q4UJ75 823 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 MSS51Q4VC12 460 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 STEAP4Q687X5 459 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 DENND2CQ68D51 928 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 KIAA0930Q6ICG6 404 aaPredicted RBP12.4□□□□□ -0.42
SNX17-208ENST00000493711 CYS1Q717R9 158 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 HSD11B1LQ7Z5J1 315 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 TECPR1Q7Z6L1 1165 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 MAML2Q8IZL2 1156 aaPredicted RBP12.4□□□□□ -0.42
SNX17-208ENST00000493711 CNPY4Q8N129 248 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.4□□□□□ -0.42
SNX17-208ENST00000493711 FBXO36Q8NEA4 188 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 DENND6BQ8NEG7 585 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 OR4K2Q8NGD2 314 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 GAB3Q8WWW8 586 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 SCG3Q8WXD2 468 aaKnown RBP12.4□□□□□ -0.42
SNX17-208ENST00000493711 NUS1Q96E22 293 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 DTD2Q96FN9 168 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 LENG8Q96PV6 779 aaPredicted RBP12.4□□□□□ -0.42
SNX17-208ENST00000493711 TTC1Q99614 292 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 GPR174Q9BXC1 333 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 SLC17A9Q9BYT1 436 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 CHRAC1Q9NRG0 131 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 TREX1Q9NSU2 369 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 PCDHGA2Q9Y5H1 932 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 RPS6KL1Q9Y6S9 549 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 FAM169AQ9Y6X4 670 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 MIA3Q5JRA6 1907 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 TECTAO75443 2155 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 MYO15AQ9UKN7 3530 aa12.4□□□□□ -0.43
SNX17-208ENST00000493711 CKAP5Q14008 2032 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 FAM47DPA6NHR8 397 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 METTL12A8MUP2 240 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 C10orf142B7Z368 130 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 AURKAO14965 403 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 PFDN6O15212 129 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 GFRA3O60609 400 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 RHOBTB1O94844 696 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 SLC4A1P02730 911 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 C1SP09871 688 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 AKT2P31751 481 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 DPP6P42658 865 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 CRADDP78560 199 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 ITGA9Q13797 1035 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 LRRC14Q15048 493 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 LONRF1Q17RB8 773 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 GPR33Q49SQ1 333 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 WDR45BQ5MNZ6 344 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 AFTPHQ6ULP2 937 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 Q6ZVL8 140 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 LPCAT2Q7L5N7 544 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 MPP5Q8N3R9 675 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 TRAM1L1Q8N609 369 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 CALML6Q8TD86 181 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 RLN3Q8WXF3 142 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.39□□□□□ -0.43
SNX17-208ENST00000493711 ULK4Q96C45 1275 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 PWWP2AQ96N64 755 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 SMIM14Q96QK8 99 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 ZSCAN5AQ9BUG6 496 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 IRF2BPLQ9H1B7 796 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 DUSP15Q9H1R2 295 aaPredicted RBP12.39□□□□□ -0.43
SNX17-208ENST00000493711 EPC1Q9H2F5 836 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 ARGLU1Q9NWB6 273 aaPredicted RBP12.39□□□□□ -0.43
SNX17-208ENST00000493711 GGT7Q9UJ14 662 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 ZFR2Q9UPR6 939 aaKnown RBP12.39□□□□□ -0.43
SNX17-208ENST00000493711 CHMP2BQ9UQN3 213 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 SLC30A1Q9Y6M5 507 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 ZNF318Q5VUA4 2279 aa12.39□□□□□ -0.43
SNX17-208ENST00000493711 GLYATL1P3A0A0U1RQE8 302 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 CCDC151A5D8V7 595 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 PRR23AA6NEV1 266 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 PRAMEF26H0Y7S4 382 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 FSBPO95073 299 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 SP9P0CG40 484 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 BPIP17213 487 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 ITGALP20701 1170 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 HNRNPA2B1P22626 353 aaKnown RBP12.38□□□□□ -0.43
SNX17-208ENST00000493711 STX2P32856 288 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 ETV3P41162 512 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 PMS2P54278 862 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 RPL6Q02878 288 aaKnown RBP12.38□□□□□ -0.43
SNX17-208ENST00000493711 MTM1Q13496 603 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 CRYMQ14894 314 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 PTPRRQ15256 657 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 AARS2Q5JTZ9 985 aaKnown RBP12.38□□□□□ -0.43
SNX17-208ENST00000493711 LYPLAL1Q5VWZ2 237 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 MRNIPQ6NTE8 343 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 ZC3H14Q6PJT7 736 aaKnown RBP12.38□□□□□ -0.43
SNX17-208ENST00000493711 TSSK4Q6SA08 328 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 SDCCAG8Q86SQ7 713 aaPredicted RBP12.38□□□□□ -0.43
SNX17-208ENST00000493711 ANKMY2Q8IV38 441 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 ZBTB44Q8NCP5 570 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms