RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 SMCO1Q147U7 214 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 TEX44Q53QW1 395 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 TNFAIP8L3Q5GJ75 292 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 USP50Q70EL3 339 aaPredicted RBP20.09■□□□□ 0.81
RNF40-203ENST00000493683 PNPT1Q8TCS8 783 aaKnown RBP20.09■□□□□ 0.81
RNF40-203ENST00000493683 DSN1Q9H410 356 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 C5orf60A6NFR6 353 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 C2P06681 752 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 HTR1BP28222 390 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 TAS2R41P59536 307 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 CAPN13Q6MZZ7 669 aaPredicted RBP20.09■□□□□ 0.81
RNF40-203ENST00000493683 ADGRD1Q6QNK2 874 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 DEF8Q6ZN54 512 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 OR5B17Q8NGF7 314 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 BCL2L14Q9BZR8 327 aa20.09■□□□□ 0.81
RNF40-203ENST00000493683 A0A0U1RQJ8 604 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 ARHGEF33A8MVX0 844 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 TGFB1I1O43294 461 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 BUD23O43709 281 aaKnown RBP20.08■□□□□ 0.81
RNF40-203ENST00000493683 LCLAT1Q6UWP7 414 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 BEND5Q7L4P6 421 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 KLHL23Q8NBE8 558 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 GPR156Q8NFN8 814 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 PJA1Q8NG27 643 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 SPACA7Q96KW9 195 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 B4GALT4O60513 344 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 FGF19O95750 216 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 BUD31P41223 144 aaPredicted RBP20.08■□□□□ 0.81
RNF40-203ENST00000493683 POLR2JP52435 117 aaKnown RBP20.08■□□□□ 0.81
RNF40-203ENST00000493683 RAB2AP61019 212 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 ELP6Q0PNE2 266 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 LPIN1Q14693 890 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 USP41Q3LFD5 358 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 CERS6Q6ZMG9 384 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 TDRPQ86YL5 185 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 C12orf50Q8NA57 414 aaPredicted RBP20.08■□□□□ 0.81
RNF40-203ENST00000493683 BPIFA1Q9NP55 256 aa20.08■□□□□ 0.81
RNF40-203ENST00000493683 FAM92AA1XBS5 289 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 SPATA31C1P0DKV0 1188 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 CXCR3P49682 368 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 ADGRG2Q8IZP9 1017 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 NPAS2Q99743 824 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 N6AMT1Q9Y5N5 214 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 CLDN11O75508 207 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 CTSKP43235 329 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 ARHGDIBP52566 201 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 IL17AQ16552 155 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 TYSND1Q2T9J0 566 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 PLET1Q6UQ28 207 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 FAM131AQ6UXB0 335 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 ZYG11AQ6WRX3 759 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 NECTIN3Q9NQS3 549 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 NUDT4Q9NZJ9 180 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 PACSIN3Q9UKS6 424 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 ZNF214Q9UL59 606 aaPredicted RBP20.08■□□□□ 0.8
RNF40-203ENST00000493683 GPC6Q9Y625 555 aaPredicted RBP20.08■□□□□ 0.8
RNF40-203ENST00000493683 COL3A1P02461 1466 aaPredicted RBP20.08■□□□□ 0.8
RNF40-203ENST00000493683 CASKO14936 926 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 MTTPP55157 894 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 CYP4F2P78329 520 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 CYP4F3Q08477 520 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 RNASEH2BQ5TBB1 312 aaKnown RBP20.08■□□□□ 0.8
RNF40-203ENST00000493683 GLYATQ6IB77 296 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 ISLR2Q6UXK2 745 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 SLC26A9Q7LBE3 791 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 ROPN1LQ96C74 230 aa20.08■□□□□ 0.8
RNF40-203ENST00000493683 SMPD3Q9NY59 655 aaPredicted RBP20.08■□□□□ 0.8
RNF40-203ENST00000493683 SLC22A2O15244 555 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 PTX3P26022 381 aaPredicted RBP20.07■□□□□ 0.8
RNF40-203ENST00000493683 GPD2P43304 727 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 USP4Q13107 963 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 AHI1Q8N157 1196 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 IRGQQ8WZA9 623 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 MECRQ9BV79 373 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 EGFL7Q9UHF1 273 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 GTPBP1O00178 669 aaKnown RBP20.07■□□□□ 0.8
RNF40-203ENST00000493683 DDNO94850 711 aaPredicted RBP20.07■□□□□ 0.8
RNF40-203ENST00000493683 TNFSF9P41273 254 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 HECTD2Q5U5R9 776 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 CHST15Q7LFX5 561 aaPredicted RBP20.07■□□□□ 0.8
RNF40-203ENST00000493683 MYO19Q96H55 970 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 NOL11Q9H8H0 719 aaKnown RBP20.07■□□□□ 0.8
RNF40-203ENST00000493683 SOHLH2Q9NX45 425 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 HMGXB4Q9UGU5 601 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 REXO2Q9Y3B8 237 aaKnown RBP20.07■□□□□ 0.8
RNF40-203ENST00000493683 PAPSS1O43252 624 aaPredicted RBP20.07■□□□□ 0.8
RNF40-203ENST00000493683 SCELO95171 688 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 PNLIPRP1P54315 467 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 UBE2R2Q712K3 238 aaPredicted RBP20.07■□□□□ 0.8
RNF40-203ENST00000493683 SVOPLQ8N434 492 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 SLC4A11Q8NBS3 891 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 FCRL2Q96LA5 508 aaPredicted RBP20.07■□□□□ 0.8
RNF40-203ENST00000493683 LRTM1Q9HBL6 345 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 TRIM39Q9HCM9 518 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 TMPRSS4Q9NRS4 437 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 RBM47A0AV96 593 aaKnown RBP20.07■□□□□ 0.8
RNF40-203ENST00000493683 TRBC1P01850 177 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 IGFBP5P24593 272 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 KIR3DL1P43629 444 aa20.07■□□□□ 0.8
RNF40-203ENST00000493683 RPS6KA3P51812 740 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms