RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 PENKP01210 267 aaPredicted RBP10.05□□□□□ -0.8
PRPF3-206ENST00000493553 MMP2P08253 660 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 DLDP09622 509 aaKnown RBP10.05□□□□□ -0.8
PRPF3-206ENST00000493553 MAOBP27338 520 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 ACVRL1P37023 503 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 DSC2Q02487 901 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 RIPK1Q13546 671 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 POU4F3Q15319 338 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 ZRSR2Q15696 482 aaKnown RBP10.05□□□□□ -0.8
PRPF3-206ENST00000493553 LRRC26Q2I0M4 334 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 MPPE1Q53F39 396 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 ARHGAP15Q53QZ3 475 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 SIRPB2Q5JXA9 342 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 MBLAC2Q68D91 279 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 FAM45BPQ6NSW5 357 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 CGB2Q6NT52 195 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 ESRP1Q6NXG1 681 aaKnown RBP10.05□□□□□ -0.8
PRPF3-206ENST00000493553 CDHR3Q6ZTQ4 885 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 BEND4Q6ZU67 534 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 UNC5BQ8IZJ1 945 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 FITM2Q8N6M3 262 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 OR6P1Q8NGX9 317 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 PIWIL2Q8TC59 973 aaKnown RBP10.05□□□□□ -0.8
PRPF3-206ENST00000493553 FAM45AQ8TCE6 357 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 ERP27Q96DN0 273 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 FAR2Q96K12 515 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 AGAP2Q99490 1192 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 TTC1Q99614 292 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 RAD9AQ99638 391 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 TRIM56Q9BRZ2 755 aaKnown RBP10.05□□□□□ -0.8
PRPF3-206ENST00000493553 TMEM120AQ9BXJ8 343 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 MRPL46Q9H2W6 279 aaKnown RBP10.05□□□□□ -0.8
PRPF3-206ENST00000493553 INTS10Q9NVR2 710 aaKnown RBP10.05□□□□□ -0.8
PRPF3-206ENST00000493553 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.05□□□□□ -0.8
PRPF3-206ENST00000493553 VTI1BQ9UEU0 232 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 SH3BP1Q9Y3L3 701 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 COMMD10Q9Y6G5 202 aa10.05□□□□□ -0.8
PRPF3-206ENST00000493553 FAM95CA0A1B0GW59 222 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 A0A1W2PQ67 120 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 E2F8A0AVK6 867 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 F8W8V4 182 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 CXCL14O95715 111 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 GLUD1P00367 558 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 AHSGP02765 367 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 ATXN1LP0C7T5 689 aaKnown RBP10.04□□□□□ -0.8
PRPF3-206ENST00000493553 EZRP15311 586 aaKnown RBP10.04□□□□□ -0.8
PRPF3-206ENST00000493553 HOXA9P31269 272 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 SLC6A4P31645 630 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 SLC1A6P48664 564 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 CSRP3P50461 194 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 DNAJB13P59910 316 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 ABCE1P61221 599 aaKnown RBP10.04□□□□□ -0.8
PRPF3-206ENST00000493553 RPS24P62847 133 aaKnown RBP10.04□□□□□ -0.8
PRPF3-206ENST00000493553 DEFB103AP81534 67 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 FPGSQ05932 587 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 CDH18Q13634 790 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 GRM3Q14832 879 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 TAF1AQ15573 450 aaPredicted RBP10.04□□□□□ -0.8
PRPF3-206ENST00000493553 FSCBQ5H9T9 825 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 CFAP157Q5JU67 520 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 METTL21CQ5VZV1 264 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 RNF219Q5W0B1 726 aaPredicted RBP10.04□□□□□ -0.8
PRPF3-206ENST00000493553 RFWD3Q6PCD5 774 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 AFTPHQ6ULP2 937 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 ZYG11AQ6WRX3 759 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 PIWIL4Q7Z3Z4 852 aaKnown RBP10.04□□□□□ -0.8
PRPF3-206ENST00000493553 SLC22A9Q8IVM8 553 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 SLC25A41Q8N5S1 370 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 CFAP61Q8NHU2 1237 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 DIS3LQ8TF46 1054 aaKnown RBP10.04□□□□□ -0.8
PRPF3-206ENST00000493553 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.04□□□□□ -0.8
PRPF3-206ENST00000493553 SCYL1Q96KG9 808 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 RMDN2Q96LZ7 410 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 KLHL5Q96PQ7 755 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 TRMOQ9BU70 441 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 ILKAPQ9H0C8 392 aaPredicted RBP10.04□□□□□ -0.8
PRPF3-206ENST00000493553 LRMDAQ9H2I8 198 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 TASP1Q9H6P5 420 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 ALG13Q9NP73 1137 aaKnown RBP10.04□□□□□ -0.8
PRPF3-206ENST00000493553 ASAH2Q9NR71 780 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 OXSMQ9NWU1 459 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 HEY2Q9UBP5 337 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 LNPEPQ9UIQ6 1025 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 VPS28Q9UK41 221 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 TMCO1Q9UM00 188 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 CHKBQ9Y259 395 aa10.04□□□□□ -0.8
PRPF3-206ENST00000493553 TRIM43BA6NCK2 446 aa10.03□□□□□ -0.8
PRPF3-206ENST00000493553 CBX4O00257 560 aa10.03□□□□□ -0.8
PRPF3-206ENST00000493553 GFRA2O00451 464 aa10.03□□□□□ -0.8
PRPF3-206ENST00000493553 SLC22A2O15244 555 aa10.03□□□□□ -0.8
PRPF3-206ENST00000493553 TBL1XO60907 577 aa10.03□□□□□ -0.8
PRPF3-206ENST00000493553 KLKB1P03952 638 aa10.03□□□□□ -0.8
PRPF3-206ENST00000493553 RB1P06400 928 aa10.03□□□□□ -0.8
PRPF3-206ENST00000493553 CKMP06732 381 aa10.03□□□□□ -0.8
PRPF3-206ENST00000493553 POU2F2P09086 479 aa10.03□□□□□ -0.8
PRPF3-206ENST00000493553 HNRNPA1P09651 372 aaKnown RBP eCLIP10.03□□□□□ -0.8
PRPF3-206ENST00000493553 NQO1P15559 274 aaKnown RBP10.03□□□□□ -0.8
PRPF3-206ENST00000493553 ALOX15P16050 662 aaPredicted RBP10.03□□□□□ -0.8
PRPF3-206ENST00000493553 CR2P20023 1033 aa10.03□□□□□ -0.8
PRPF3-206ENST00000493553 CD9P21926 228 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms