RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 NXNL2Q5VZ03 156 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 MAP4K3Q8IVH8 894 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 TCTE3Q8IZS6 198 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 PJA1Q8NG27 643 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 SPPL2BQ8TCT7 592 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 BPIFB1Q8TDL5 484 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 RORBQ92753 470 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 LGALS12Q96DT0 336 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 HEXIM2Q96MH2 286 aaKnown RBP9.69□□□□□ -0.86
VPS8-225ENST00000492449 ZNF578Q96N58 590 aaPredicted RBP9.69□□□□□ -0.86
VPS8-225ENST00000492449 NAT9Q9BTE0 207 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 MEAF6Q9HAF1 191 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 WASH6PQ9NQA3 447 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 GLTPQ9NZD2 209 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 PCSK1NQ9UHG2 260 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 INTS6Q9UL03 887 aaKnown RBP9.69□□□□□ -0.86
VPS8-225ENST00000492449 A8MX80 341 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 ARPC2O15144 300 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 SGTAO43765 313 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 DFNA5O60443 496 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 PDGFAP04085 211 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 IL1R1P14778 569 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 ZNF30P17039 623 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 LIMK2P53671 638 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 MFSD13AQ14CX5 517 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 PSMD5Q16401 504 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 ZACNQ401N2 412 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 AGKQ53H12 422 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 RBM20Q5T481 1227 aaKnown RBP9.69□□□□□ -0.86
VPS8-225ENST00000492449 PIK3R6Q5UE93 754 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 TIGD3Q6B0B8 471 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 TMEM270Q6UE05 265 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 ZNF517Q6ZMY9 492 aaPredicted RBP9.69□□□□□ -0.86
VPS8-225ENST00000492449 KIAA0319LQ8IZA0 1049 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 CYP2W1Q8TAV3 490 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 ZNF516Q92618 1163 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 NCLNQ969V3 563 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 PHOX2BQ99453 314 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 MORF4L1Q9UBU8 362 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 TRAPPC4Q9Y296 219 aa9.69□□□□□ -0.86
VPS8-225ENST00000492449 ZNF487B1APH4 448 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 H0Y626 953 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 MEN1O00255 615 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 TPST1O60507 370 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 ZNF254O75437 659 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 UGT2B17O75795 530 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 TRUB2O95900 331 aaKnown RBP9.68□□□□□ -0.86
VPS8-225ENST00000492449 GTF2E2P29084 291 aaKnown RBP9.68□□□□□ -0.86
VPS8-225ENST00000492449 GMPRP36959 345 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 ACOT2P49753 483 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 LIG4P49917 911 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 UGT2B15P54855 530 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 NCS1P62166 190 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 GABPAQ06546 454 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 GPAT3Q53EU6 434 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 SDE2Q6IQ49 451 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 MAMSTRQ6ZN01 415 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 NIPA1Q7RTP0 329 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 PLD3Q8IV08 490 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 LINC00518Q8N0U6 118 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 TMEM199Q8N511 208 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 C2orf69Q8N8R5 385 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 APPL2Q8NEU8 664 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 OR4M1Q8NGD0 313 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 SLC7A6Q92536 515 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 DMRTB1Q96MA1 342 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 SLC30A3Q99726 388 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 WDR18Q9BV38 432 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 ACE2Q9BYF1 805 aaPredicted RBP9.68□□□□□ -0.86
VPS8-225ENST00000492449 WDR11Q9BZH6 1224 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 LRRC4Q9HBW1 653 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 FAM118AQ9NWS6 357 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 GMPR2Q9P2T1 348 aaKnown RBP9.68□□□□□ -0.86
VPS8-225ENST00000492449 PCDHGB6Q9Y5F9 930 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 ARPC4-TTLL3A0A0A6YYG9 625 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 WDR27A2RRH5 827 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 KRT87PA6NCN2 255 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 LOC110117498-PIK3R3F6TDL0 507 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 H3BUI4 141 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 UPK1AO00322 258 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 B3GALNT1O75752 331 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 HLA-DRAP01903 254 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 C4BPAP04003 597 aaKnown RBP9.68□□□□□ -0.86
VPS8-225ENST00000492449 RBP1P09455 135 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 SBK3P0C264 359 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 UQCRC1P31930 480 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 SPRP35270 261 aaPredicted RBP9.68□□□□□ -0.86
VPS8-225ENST00000492449 NKX3-2P78367 333 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 MVKQ03426 396 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 PLEKHG6Q3KR16 790 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 HSDL1Q3SXM5 330 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 CLVS2Q5SYC1 327 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 CMC1Q7Z7K0 106 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 RIMKLAQ8IXN7 391 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 PQLC3Q8N755 202 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 HERVK_113Q902F9 699 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 BIRC7Q96CA5 298 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 APOL4Q9BPW4 351 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 LXNQ9BS40 222 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 SERHL2Q9H4I8 314 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms