RNA–Protein interactions for RNA: ENST00000492234.5

AGAP3-223, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-223	ENST00000492234	SPATA16	Q9BXB7	569 aa		13.11	□□□□□ -0.31
AGAP3-223	ENST00000492234	WDR26	Q9H7D7	661 aa		13.11	□□□□□ -0.31
AGAP3-223	ENST00000492234	ARNT2	Q9HBZ2	717 aa		13.11	□□□□□ -0.31
AGAP3-223	ENST00000492234	DNAJC28	Q9NX36	388 aa		13.11	□□□□□ -0.31
AGAP3-223	ENST00000492234	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
AGAP3-223	ENST00000492234	PCYOX1	Q9UHG3	505 aa		13.11	□□□□□ -0.31
AGAP3-223	ENST00000492234	MOSPD1	Q9UJG1	213 aa		13.11	□□□□□ -0.31
AGAP3-223	ENST00000492234	ARL5A	Q9Y689	179 aa		13.11	□□□□□ -0.31
AGAP3-223	ENST00000492234	TMEM131	Q92545	1883 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	PIEZO1	Q92508	2521 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	SPTY2D1-AS1	A0A0U1RR47	76 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	DFNA5	O60443	496 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	BPI	P17213	487 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	HMGCL	P35914	325 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	GRIA1	P42261	906 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	ARRB1	P49407	418 aa	Predicted RBP	13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	SARNP	P82979	210 aa	Known RBP	13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	TMPRSS15	P98073	1019 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	DR1	Q01658	176 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	DPT	Q07507	201 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	CDH17	Q12864	832 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	PTPRCAP	Q14761	206 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	POU6F1	Q14863	301 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	ZNF423	Q2M1K9	1284 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	RD3	Q7Z3Z2	195 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	NLRP8	Q86W28	1048 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	HEATR4	Q86WZ0	1026 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	RAVER1	Q8IY67	606 aa	Known RBP	13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	SLC22A18AS	Q8N1D0	253 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	OXR1	Q8N573	874 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	GPR26	Q8NDV2	337 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	OR4K2	Q8NGD2	314 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	KIF18A	Q8NI77	898 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	FUBP1	Q96AE4	644 aa	Known RBP	13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	AGAP2	Q99490	1192 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	ERVMER34-1	Q9H9K5	563 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	ASIC3	Q9UHC3	531 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	CDC23	Q9UJX2	597 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	KCTD3	Q9Y597	815 aa		13.1	□□□□□ -0.31
AGAP3-223	ENST00000492234	ASCC3	Q8N3C0	2202 aa	Known RBP	13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	PCDH15	Q96QU1	1955 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	GVINP1	Q7Z2Y8	2422 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	INPP4B	O15327	924 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	SUN1	O94901	812 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	PYGL	P06737	847 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	TRIM23	P36406	574 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	PTGIR	P43119	386 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	SESN2	P58004	480 aa	Predicted RBP	13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	PDE1B	Q01064	536 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	CKAP4	Q07065	602 aa	Known RBP	13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	C2orf54	Q08AI8	447 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	BNIP3	Q12983	259 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	FZD2	Q14332	565 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	NFATC4	Q14934	902 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	SUZ12	Q15022	739 aa	Known RBP	13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	TPRG1L	Q5T0D9	272 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	CERCAM	Q5T4B2	595 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	DOK6	Q6PKX4	331 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	SPATA4	Q8NEY3	305 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	NETO1	Q8TDF5	533 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	LGR4	Q9BXB1	951 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	CDH19	Q9H159	772 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	CASS4	Q9NQ75	786 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	EIF2B3	Q9NR50	452 aa	Known RBP	13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	TM7SF3	Q9NS93	570 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	IL17C	Q9P0M4	197 aa		13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	CDV3	Q9UKY7	258 aa	Known RBP	13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234	TP53BP1	Q12888	1972 aa	Predicted RBP	13.09	□□□□□ -0.31
AGAP3-223	ENST00000492234		A0A1B0GTQ1	180 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	TCRBV7S3A2	A0A539	114 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	CCDC78	A2IDD5	438 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	ASMTL	O95671	621 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	HOXC4	P09017	264 aa	Predicted RBP	13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	JUND	P17535	347 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	TPSB2	P20231	275 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	KEL	P23276	732 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	SPAM1	P38567	509 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	CCT8	P50990	548 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	KIAA1024L	P59773	190 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	CDK3	Q00526	305 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	CDK16	Q00536	496 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	PPARD	Q03181	441 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	EIF2B5	Q13144	721 aa	Known RBP	13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	MSLN	Q13421	630 aa	Predicted RBP	13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	PTK6	Q13882	451 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	TPSAB1	Q15661	275 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	CCDC38	Q502W7	563 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	HENMT1	Q5T8I9	393 aa	Known RBP	13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	ZDHHC20	Q5W0Z9	365 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	FAM151B	Q6UXP7	276 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	MACC1	Q6ZN28	852 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	PARG	Q86W56	976 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	HID1	Q8IV36	788 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	TSACC	Q96A04	125 aa	Predicted RBP	13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	HIC2	Q96JB3	615 aa		13.08	□□□□□ -0.32
AGAP3-223	ENST00000492234	WDR92	Q96MX6	357 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms