RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 TRIM55Q9BYV6 548 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 VPS11Q9H270 941 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 VCXQ9H320 206 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 ZDHHC6Q9H6R6 413 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 VPS45Q9NRW7 570 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 RCOR3Q9P2K3 495 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-219ENST00000491747 UBA2Q9UBT2 640 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-219ENST00000491747 FZD4Q9ULV1 537 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 C1QTNF3-AMACRE9PGA6 284 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 KPNA3O00505 521 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-219ENST00000491747 MFSD11O43934 449 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 GJB3O75712 270 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 HAUS5O94927 633 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 MAP3K6O95382 1288 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 PEX11BO96011 259 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 GSRP00390 522 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 PTPN7P35236 360 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 VHLP40337 213 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 PDK2Q15119 407 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 OASLQ15646 514 aaKnown RBP9.44□□□□□ -0.9
BRCA1-219ENST00000491747 MYLK3Q32MK0 819 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 PIP5KL1Q5T9C9 394 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 MFSD7Q6UXD7 560 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 RGL4Q8IZJ4 473 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 LZTR1Q8N653 840 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 OR14C36Q8NHC7 312 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 C1orf216Q8TAB5 229 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 PYROXD1Q8WU10 500 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 FOXJ1Q92949 421 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 BTBD10Q9BSF8 475 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 EVLQ9UI08 416 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-219ENST00000491747 EIF2B4Q9UI10 523 aaKnown RBP9.44□□□□□ -0.9
BRCA1-219ENST00000491747 IPO11Q9UI26 975 aaKnown RBP9.44□□□□□ -0.9
BRCA1-219ENST00000491747 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-219ENST00000491747 FARP1Q9Y4F1 1045 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-219ENST00000491747 LRRK1Q38SD2 2015 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 DPPA5A6NC42 116 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 MUSKO15146 869 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 NVLO15381 856 aaKnown RBP9.43□□□□□ -0.9
BRCA1-219ENST00000491747 PLRG1O43660 514 aaKnown RBP9.43□□□□□ -0.9
BRCA1-219ENST00000491747 AHCYL1O43865 530 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 MAFKO60675 156 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 IFNB1P01574 187 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 PRNPP04156 253 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 FESP07332 822 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 PDHA1P08559 390 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 ADRA1DP25100 572 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 RECQLP46063 649 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-219ENST00000491747 ARL4CP56559 192 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 RHOAP61586 193 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 PPP2CBP62714 309 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 PPP2CAP67775 309 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 MXRA7P84157 204 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 IL10RBQ08334 325 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 SLC10A2Q12908 348 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-219ENST00000491747 PAFAH1B3Q15102 231 aaKnown RBP9.43□□□□□ -0.9
BRCA1-219ENST00000491747 FAM46CQ5VWP2 391 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 ADGRD1Q6QNK2 874 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 SPOCD1Q6ZMY3 1216 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 RYBPQ8N488 228 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-219ENST00000491747 MCUR1Q96AQ8 359 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 ZNF670Q9BS34 389 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 MANSC1Q9H8J5 431 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 DDX56Q9NY93 547 aaKnown RBP9.43□□□□□ -0.9
BRCA1-219ENST00000491747 RABGEF1Q9UJ41 708 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 DCTN4Q9UJW0 460 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 LRCH1Q9Y2L9 728 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 DNAH14Q0VDD8 3507 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 hCG_1818297A0A087WSY0 165 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 A0A0G2JND7 137 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 LNP1A1A4G5 178 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 TTC24A2A3L6 582 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-219ENST00000491747 ENO4A6NNW6 628 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 MEI4A8MW99 385 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 GYG2O15488 501 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 ETS1P14921 441 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 SNRPD1P62314 119 aaKnown RBP9.43□□□□□ -0.9
BRCA1-219ENST00000491747 SLC10A7Q0GE19 358 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 C11orf91Q3C1V1 193 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 TRIM61Q5EBN2 209 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 FAM182AQ5T1J6 154 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 KIAA0895LQ68EN5 471 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 IRGCQ6NXR0 463 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 SLC23A3Q6PIS1 610 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 C3orf62Q6ZUJ4 267 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 PPIL6Q8IXY8 311 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 OR2T34Q8NGX1 318 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 TCP10LQ8TDR4 215 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 SNX19Q92543 992 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 RNF157Q96PX1 679 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 PAFAH2Q99487 392 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 TSC22D3Q99576 134 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 MIPEPQ99797 713 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 TMEM121Q9BTD3 319 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 MIR1-1HGQ9H1L0 117 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 ACSS3Q9H6R3 686 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 SP110Q9HB58 689 aa9.43□□□□□ -0.9
BRCA1-219ENST00000491747 MTO1Q9Y2Z2 717 aaKnown RBP9.43□□□□□ -0.9
BRCA1-219ENST00000491747 DCHS1Q96JQ0 3298 aa9.42□□□□□ -0.9
BRCA1-219ENST00000491747 TBC1D3DA0A087WVF3 549 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms