RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 PIM3Q86V86 326 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 GALNT13Q8IUC8 556 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 FBXO39Q8N4B4 442 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 GPBAR1Q8TDU6 330 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 ZDHHC1Q8WTX9 485 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 RAPGEF5Q92565 580 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 LIN37Q96GY3 246 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 SLC46A1Q96NT5 459 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 UBL7Q96S82 380 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 CMKLR1Q99788 373 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 ZMYND15Q9H091 742 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 FAM83DQ9H4H8 585 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 WDR70Q9NW82 654 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 PNMA8BQ9ULN7 279 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 ANKRD36A6QL64 1941 aa16.51■□□□□ 0.23
PDLIM2-217ENST00000491330 DOCK9Q9BZ29 2069 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 KCNK1O00180 336 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 NTN3O00634 580 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 KLK10O43240 276 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 TLX3O43711 291 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 FZD6O60353 706 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 TNFSF15O95150 251 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 CEACAM5P06731 702 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 PDHA1P08559 390 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 CDC25BP30305 580 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 CD86P42081 329 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 CCL7P80098 99 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 IFI35P80217 286 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 TECPR1Q7Z6L1 1165 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 CBARPQ8N350 705 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 PQLC3Q8N755 202 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 AVL9Q8NBF6 648 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 RNF25Q96BH1 459 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 OR2M4Q96R27 311 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 DPYSL5Q9BPU6 564 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 ABCG8Q9H221 673 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 RMI1Q9H9A7 625 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 CD84Q9UIB8 345 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 RALYQ9UKM9 306 aaKnown RBP16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 SUFUQ9UMX1 484 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 PLXNB3Q9ULL4 1909 aa16.5■□□□□ 0.23
PDLIM2-217ENST00000491330 TEX51A0A1B0GUA7 166 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 ANKRD66B4E2M5 251 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 D6RAR5 112 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 PLD2O14939 933 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 ZRANB2O95218 330 aaKnown RBP eCLIP16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 HLA-DQB2P05538 268 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 ITGA2BP08514 1039 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 ACTR1BP42025 376 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 STC1P52823 247 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 ACTR1AP61163 376 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 DYNLT1P63172 113 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 PTSQ03393 145 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 MAP9Q49MG5 647 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 CCDC181Q5TID7 509 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 SLC9A4Q6AI14 798 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 SLC30A9Q6PML9 568 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 TSPAN33Q86UF1 283 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 JAMLQ86YT9 394 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 CCDC112Q8NEF3 446 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 P3H4Q92791 437 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 NAF1Q96HR8 494 aaKnown RBP16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 RBM41Q96IZ5 413 aaKnown RBP16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 FCRL3Q96P31 734 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 LYSMD1Q96S90 227 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 FRMD8Q9BZ67 464 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 CAAP1Q9H8G2 361 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 TAAR2Q9P1P5 351 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 VPS18Q9P253 973 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 SLC17A4Q9Y2C5 497 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 PCDHB11Q9Y5F2 797 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 SHROOM3Q8TF72 1996 aa16.49■□□□□ 0.23
PDLIM2-217ENST00000491330 URB1O60287 2271 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 PSTPIP1O43586 416 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 CLDN7O95471 211 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 CPNE6O95741 557 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 COMTP21964 271 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 ITPKBP27987 946 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 ALDH4A1P30038 563 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 CCKBRP32239 447 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 GPR3P46089 330 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 NAP1L1P55209 391 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 CXADRP78310 365 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 HLTFQ14527 1009 aaKnown RBP eCLIP16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 CCDC50Q8IVM0 306 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 SPACA3Q8IXA5 215 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 RCOR2Q8IZ40 523 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 PLD5Q8N7P1 536 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 ARRDC2Q8TBH0 407 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 TFB1MQ8WVM0 346 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 UBE2Q2Q8WVN8 375 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 SH3KBP1Q96B97 665 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 LRRC45Q96CN5 670 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 AHCYL2Q96HN2 611 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 AGAP3Q96P47 875 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 RIOK2Q9BVS4 552 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 GPR63Q9BZJ6 419 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 SLC25A51Q9H1U9 297 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 ZFYVE1Q9HBF4 777 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 ZNHIT2Q9UHR6 403 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms