RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CRABP2P29373 138 aa22.77■■□□□ 1.24
USF3-203ENST00000491165 ARRB2P32121 409 aa22.77■■□□□ 1.24
USF3-203ENST00000491165 MAXP61244 160 aa22.77■■□□□ 1.24
USF3-203ENST00000491165 ITGA9Q13797 1035 aa22.77■■□□□ 1.24
USF3-203ENST00000491165 HNRNPDQ14103 355 aaKnown RBP22.77■■□□□ 1.24
USF3-203ENST00000491165 PDPK2PQ6A1A2 396 aa22.77■■□□□ 1.24
USF3-203ENST00000491165 ADGRG6Q86SQ4 1221 aa22.77■■□□□ 1.24
USF3-203ENST00000491165 AHI1Q8N157 1196 aa22.77■■□□□ 1.24
USF3-203ENST00000491165 EZH1Q92800 747 aaPredicted RBP22.77■■□□□ 1.24
USF3-203ENST00000491165 CMTM5Q96DZ9 223 aa22.77■■□□□ 1.24
USF3-203ENST00000491165 TSC22D3Q99576 134 aa22.77■■□□□ 1.24
USF3-203ENST00000491165 GORASP1Q9BQQ3 440 aa22.77■■□□□ 1.24
USF3-203ENST00000491165 C2orf49Q9BVC5 232 aaPredicted RBP22.77■■□□□ 1.24
USF3-203ENST00000491165 ENO4A6NNW6 628 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 CTHP32929 405 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 MAGEA12P43365 314 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 SERPINB8P50452 374 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 TDGQ13569 410 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 PID1Q7Z2X4 250 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 TERB1Q8NA31 727 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 ISL2Q96A47 359 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 ACDQ96AP0 544 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 RBBP8Q99708 897 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 LRRC40Q9H9A6 602 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 S100A14Q9HCY8 104 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 ZDHHC4Q9NPG8 344 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 TRPV5Q9NQA5 729 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 RBM22Q9NW64 420 aaKnown RBP eCLIP22.76■■□□□ 1.23
USF3-203ENST00000491165 HCN2Q9UL51 889 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 FCF1Q9Y324 198 aaKnown RBP22.76■■□□□ 1.23
USF3-203ENST00000491165 ZNF195O14628 629 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 SPRP35270 261 aaPredicted RBP22.76■■□□□ 1.23
USF3-203ENST00000491165 IHHQ14623 411 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 GRAMD4Q6IC98 578 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 CMC1Q7Z7K0 106 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 DCLK2Q8N568 766 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 TEX26Q8N6G2 289 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 ZNF483Q8TF39 744 aaPredicted RBP22.76■■□□□ 1.23
USF3-203ENST00000491165 MYO19Q96H55 970 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 EXOC2Q96KP1 924 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 TEKT5Q96M29 485 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 FCRL3Q96P31 734 aaPredicted RBP22.76■■□□□ 1.23
USF3-203ENST00000491165 SPATS2LQ9NUQ6 558 aaKnown RBP22.76■■□□□ 1.23
USF3-203ENST00000491165 UBA2Q9UBT2 640 aaPredicted RBP22.76■■□□□ 1.23
USF3-203ENST00000491165 SLCO3A1Q9UIG8 710 aa22.76■■□□□ 1.23
USF3-203ENST00000491165 ZNF821O75541 412 aaPredicted RBP22.75■■□□□ 1.23
USF3-203ENST00000491165 ZNF189O75820 626 aaPredicted RBP22.75■■□□□ 1.23
USF3-203ENST00000491165 USP1O94782 785 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 FESP07332 822 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 BMP1P13497 986 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 RGRP47804 291 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 CYTH1Q15438 398 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 PTPRNQ16849 979 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 RALGPS1Q5JS13 557 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 MARC1Q5VT66 337 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 ZNF557Q8N988 423 aaPredicted RBP22.75■■□□□ 1.23
USF3-203ENST00000491165 OR52K1Q8NGK4 314 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 FATE1Q969F0 183 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 IFT43Q96FT9 208 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 NSMCE3Q96MG7 304 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 CIPCQ9C0C6 399 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 KLHL8Q9P2G9 620 aaPredicted RBP22.75■■□□□ 1.23
USF3-203ENST00000491165 PIAS3Q9Y6X2 628 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 AHCYL1O43865 530 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 TMCC1O94876 653 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 GALK1P51570 392 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 VWA5B1Q5TIE3 1220 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.75■■□□□ 1.23
USF3-203ENST00000491165 OR6Y1Q8NGX8 325 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 ACTRT2Q8TDY3 377 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 ZNF669Q96BR6 464 aaPredicted RBP22.75■■□□□ 1.23
USF3-203ENST00000491165 MRGPRX3Q96LB0 322 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 NT5MQ9NPB1 228 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 ZNF358Q9NW07 568 aa22.75■■□□□ 1.23
USF3-203ENST00000491165 KAT7O95251 611 aa22.74■■□□□ 1.23
USF3-203ENST00000491165 SRFP11831 508 aa22.74■■□□□ 1.23
USF3-203ENST00000491165 NCF2P19878 526 aaPredicted RBP22.74■■□□□ 1.23
USF3-203ENST00000491165 GMPRP36959 345 aa22.74■■□□□ 1.23
USF3-203ENST00000491165 EIF2DP41214 584 aaKnown RBP22.74■■□□□ 1.23
USF3-203ENST00000491165 SERPINH1P50454 418 aaKnown RBP22.74■■□□□ 1.23
USF3-203ENST00000491165 LIMK2P53671 638 aa22.74■■□□□ 1.23
USF3-203ENST00000491165 CDC16Q13042 620 aa22.74■■□□□ 1.23
USF3-203ENST00000491165 RNF220Q5VTB9 566 aa22.74■■□□□ 1.23
USF3-203ENST00000491165 STRA8Q7Z7C7 330 aa22.74■■□□□ 1.23
USF3-203ENST00000491165 RNF135Q8IUD6 432 aa22.74■■□□□ 1.23
USF3-203ENST00000491165 JADE3Q92613 823 aa22.74■■□□□ 1.23
USF3-203ENST00000491165 PDP2Q9P2J9 529 aa22.74■■□□□ 1.23
USF3-203ENST00000491165 ANKRD36A6QL64 1941 aa22.74■■□□□ 1.23
USF3-203ENST00000491165 C19orf67A6NJJ6 358 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 BUD23O43709 281 aaKnown RBP22.73■■□□□ 1.23
USF3-203ENST00000491165 SRCP12931 536 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 NFKB1P19838 968 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 RENBPP51606 427 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 EPHB1P54762 984 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 ECT2LQ008S8 904 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 BTKQ06187 659 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 OLIG2Q13516 323 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 PGM2L1Q6PCE3 622 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 ATXN7L3BQ96GX2 97 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 ZNF599Q96NL3 588 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms