RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 USP45Q70EL2 814 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 DAAM2Q86T65 1068 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 LRRC8AQ8IWT6 810 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 ATPAF2Q8N5M1 289 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 FAM46DQ8NEK8 389 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 FUBP1Q96AE4 644 aaKnown RBP10.36□□□□□ -0.75
TTC28-207ENST00000490475 FAF2Q96CS3 445 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 NUS1Q96E22 293 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 PDXPQ96GD0 296 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 PRR11Q96HE9 360 aaPredicted RBP10.36□□□□□ -0.75
TTC28-207ENST00000490475 RNF157Q96PX1 679 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 CCNL2Q96S94 520 aaPredicted RBP10.36□□□□□ -0.75
TTC28-207ENST00000490475 MGME1Q9BQP7 344 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 ZNF670Q9BS34 389 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 DPEP2Q9H4A9 486 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 EPB41L5Q9HCM4 733 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 AMACRQ9UHK6 382 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 ATXN7L1Q9ULK2 861 aaPredicted RBP10.36□□□□□ -0.75
TTC28-207ENST00000490475 PNMA8BQ9ULN7 279 aaPredicted RBP10.36□□□□□ -0.75
TTC28-207ENST00000490475 MACROD2A1Z1Q3 448 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 TTC24A2A3L6 582 aaPredicted RBP10.35□□□□□ -0.75
TTC28-207ENST00000490475 BTNL10A8MVZ5 291 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 MAFKO60675 156 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 PEX11BO96011 259 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 CPP00450 1065 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 KRT1P04264 644 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 CCNB1P14635 433 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 ZNF30P17039 623 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 UGT1A5P35504 534 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 GPR3P46089 330 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 RGRP47804 291 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 MARCKSL1P49006 195 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 CCL7P80098 99 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 GBE1Q04446 702 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 DPTQ07507 201 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 SLC10A7Q0GE19 358 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 KIF5AQ12840 1032 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 PAFAH1B3Q15102 231 aaKnown RBP10.35□□□□□ -0.75
TTC28-207ENST00000490475 ARMC12Q5T9G4 340 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 C11orf63Q6NUN7 778 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 MFSD7Q6UXD7 560 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 PIM3Q86V86 326 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 ZSWIM9Q86XI8 627 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 ZSCAN1Q8NBB4 408 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 GPBAR1Q8TDU6 330 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 PDCD6IPQ8WUM4 868 aaKnown RBP10.35□□□□□ -0.75
TTC28-207ENST00000490475 OR1E3Q8WZA6 343 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 KRT35Q92764 455 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 SCRN2Q96FV2 425 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 COQ10AQ96MF6 247 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 MAK16Q9BXY0 300 aaKnown RBP10.35□□□□□ -0.75
TTC28-207ENST00000490475 TEX101Q9BY14 249 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 CDH19Q9H159 772 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 CPNE5Q9HCH3 593 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 CYP4F12Q9HCS2 524 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 FGF22Q9HCT0 170 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 DDX56Q9NY93 547 aaKnown RBP10.35□□□□□ -0.75
TTC28-207ENST00000490475 LRIT1Q9P2V4 623 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 B4GALT6Q9UBX8 382 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 MOSPD1Q9UJG1 213 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 PPIL1Q9Y3C6 166 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 PCDHB11Q9Y5F2 797 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 ADGRG1Q9Y653 693 aa10.35□□□□□ -0.75
TTC28-207ENST00000490475 GRID2IPA4D2P6 1211 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 TMEM202A6NGA9 273 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 RHPN2P1A8MT19 583 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 HGSO14964 777 aaPredicted RBP10.34□□□□□ -0.75
TTC28-207ENST00000490475 MFSD11O43934 449 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 HEXIM1O94992 359 aaKnown RBP10.34□□□□□ -0.75
TTC28-207ENST00000490475 CPNE6O95741 557 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 CELA2BP08218 269 aaPredicted RBP10.34□□□□□ -0.75
TTC28-207ENST00000490475 LIPCP11150 499 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 SFTPCP11686 197 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 CR2P20023 1033 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 SLC5A2P31639 672 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 MMP13P45452 471 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 PDX1P52945 283 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 ZFP36L1Q07352 338 aaKnown RBP10.34□□□□□ -0.75
TTC28-207ENST00000490475 ADCY2Q08462 1091 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 TRA2AQ13595 282 aaKnown RBP eCLIP10.34□□□□□ -0.75
TTC28-207ENST00000490475 HLTFQ14527 1009 aaKnown RBP eCLIP10.34□□□□□ -0.752e-6■■□□□ 13.6
TTC28-207ENST00000490475 ODF2Q5BJF6 829 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 FAM182AQ5T1J6 154 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 NPNTQ6UXI9 565 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 SPRED1Q7Z699 444 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 NLRP8Q86W28 1048 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 JAMLQ86YT9 394 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 RFX6Q8HWS3 928 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 ZNF843Q8N446 348 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 PLD5Q8N7P1 536 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 LRRC57Q8N9N7 239 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 PLA2G15Q8NCC3 412 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 CCDC112Q8NEF3 446 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 FATE1Q969F0 183 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 DTD2Q96FN9 168 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 NSMCE3Q96MG7 304 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 POLR1EQ9GZS1 481 aaKnown RBP10.34□□□□□ -0.75
TTC28-207ENST00000490475 TMEM168Q9H0V1 697 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 CARS2Q9HA77 564 aaKnown RBP10.34□□□□□ -0.75
TTC28-207ENST00000490475 HEY1Q9Y5J3 304 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms