RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	SNX19	Q92543	992 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	CFAP36	Q96G28	342 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	18.18	■□□□□ 0.5
SRM-206	ENST00000490101	IL36A	Q9UHA7	158 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	RALY	Q9UKM9	306 aa	Known RBP	18.18	■□□□□ 0.5
SRM-206	ENST00000490101	KLK13	Q9UKR3	277 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	PLAA	Q9Y263	795 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	PPIL1	Q9Y3C6	166 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	TCAF1	Q9Y4C2	921 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	NFS1	Q9Y697	457 aa		18.18	■□□□□ 0.5
SRM-206	ENST00000490101	TSPAN11	A1L157	253 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	HEATR9	A2RTY3	570 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	SIN3B	O75182	1162 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	USP1	O94782	785 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	EIF3B	P55884	814 aa	Known RBP	18.17	■□□□□ 0.5
SRM-206	ENST00000490101	ELAVL3	Q14576	367 aa	Known RBP	18.17	■□□□□ 0.5
SRM-206	ENST00000490101	ANKRD20A4	Q4UJ75	823 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	ARSI	Q5FYB1	569 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	SPANXN3	Q5MJ09	141 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	NLRP9	Q7RTR0	991 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	STK40	Q8N2I9	435 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	TMIE	Q8NEW7	156 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	BRSK1	Q8TDC3	778 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	DNASE2B	Q8WZ79	361 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	OR8D1	Q8WZ84	308 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	GATA6	Q92908	595 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	ZIM3	Q96PE6	472 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	SRPK1	Q96SB4	655 aa	Known RBP	18.17	■□□□□ 0.5
SRM-206	ENST00000490101	FAM129B	Q96TA1	746 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	TMEM109	Q9BVC6	243 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	CHRAC1	Q9NRG0	131 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	HACD3	Q9P035	362 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	DKK3	Q9UBP4	350 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	EIF2B4	Q9UI10	523 aa	Known RBP	18.17	■□□□□ 0.5
SRM-206	ENST00000490101	RIMKLB	Q9ULI2	386 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	PHTF1	Q9UMS5	762 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	PKD1L2	Q7Z442	2459 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	FAM208B	Q5VWN6	2430 aa		18.17	■□□□□ 0.5
SRM-206	ENST00000490101	DMXL2	Q8TDJ6	3036 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	MROH6	A6NGR9	719 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	METTL12	A8MUP2	240 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	LEFTY1	O75610	366 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	PRNP	P04156	253 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	UGT2B4	P06133	528 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	CTSL	P07711	333 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	EPHB1	P54762	984 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	CAMK2G	Q13555	558 aa	Predicted RBP	18.16	■□□□□ 0.5
SRM-206	ENST00000490101	STAT4	Q14765	748 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	CRYM	Q14894	314 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	BRAT1	Q6PJG6	821 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	ZSWIM9	Q86XI8	627 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	NAXD	Q8IW45	347 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	CHCHD4	Q8N4Q1	142 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	UHMK1	Q8TAS1	419 aa	Known RBP	18.16	■□□□□ 0.5
SRM-206	ENST00000490101	GSDMB	Q8TAX9	411 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	KLHL32	Q96NJ5	620 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	CCDC77	Q9BR77	488 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	TRIM56	Q9BRZ2	755 aa	Known RBP	18.16	■□□□□ 0.5
SRM-206	ENST00000490101	TRABD	Q9H4I3	376 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	MAGEE1	Q9HCI5	957 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	PRSS16	Q9NQE7	514 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	MOCS1	Q9NZB8	636 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	NEUROG3	Q9Y4Z2	214 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	SPO11	Q9Y5K1	396 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	RPS6KL1	Q9Y6S9	549 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	FAM169A	Q9Y6X4	670 aa		18.16	■□□□□ 0.5
SRM-206	ENST00000490101	ANKRD11	Q6UB99	2663 aa	Predicted RBP	18.15	■□□□□ 0.5
SRM-206	ENST00000490101		A0A0J9YYE9	177 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	TCRBV9S1A1T	A0A576	114 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	BCAT2	O15382	392 aa	Predicted RBP	18.15	■□□□□ 0.5
SRM-206	ENST00000490101	LDB2	O43679	373 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	TCEA3	O75764	348 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	IGLV3-19	P01714	112 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	TRBC1	P01850	177 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	SHBG	P04278	402 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	PSMA3	P25788	255 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	SLC8A1	P32418	973 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	STX2	P32856	288 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	POLR2L	P62875	67 aa	Known RBP	18.15	■□□□□ 0.5
SRM-206	ENST00000490101	SLC14A1	Q13336	389 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	SEPT6	Q14141	434 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	TRIP6	Q15654	476 aa	Known RBP	18.15	■□□□□ 0.5
SRM-206	ENST00000490101	ZNF805	Q5CZA5	627 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	TSTD2	Q5T7W7	516 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	ZNF449	Q6P9G9	518 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	CAPN12	Q6ZSI9	719 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	DSG4	Q86SJ6	1040 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	NDUFAF2	Q8N183	169 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	KDF1	Q8NAX2	398 aa	Predicted RBP	18.15	■□□□□ 0.5
SRM-206	ENST00000490101	GRIN3A	Q8TCU5	1115 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	BLOC1S5	Q8TDH9	187 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	FBF1	Q8TES7	1133 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	PEX13	Q92968	403 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	FCRL3	Q96P31	734 aa	Predicted RBP	18.15	■□□□□ 0.5
SRM-206	ENST00000490101	ZDHHC5	Q9C0B5	715 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	ACBD3	Q9H3P7	528 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	ACSS3	Q9H6R3	686 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	IL21R	Q9HBE5	538 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	TREX1	Q9NSU2	369 aa		18.15	■□□□□ 0.5
SRM-206	ENST00000490101	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	18.15	■□□□□ 0.5	8e-17	■□□□□ 8.9

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms