RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 TUBA1BP68363 451 aa5.66□□□□□ -1.5
VPS26A-206ENST00000489794 CSNK2A1P68400 391 aaPredicted RBP5.66□□□□□ -1.5
VPS26A-206ENST00000489794 MRPS34P82930 218 aaKnown RBP5.66□□□□□ -1.5
VPS26A-206ENST00000489794 ZSCAN23Q3MJ62 389 aa5.66□□□□□ -1.5
VPS26A-206ENST00000489794 JADE1Q6IE81 842 aa5.66□□□□□ -1.5
VPS26A-206ENST00000489794 CCDC13Q8IYE1 715 aa5.66□□□□□ -1.5
VPS26A-206ENST00000489794 TTC39CQ8N584 583 aa5.66□□□□□ -1.5
VPS26A-206ENST00000489794 C1orf131Q8NDD1 294 aaKnown RBP5.66□□□□□ -1.5
VPS26A-206ENST00000489794 CSNK2A3Q8NEV1 391 aa5.66□□□□□ -1.5
VPS26A-206ENST00000489794 IGSF8Q969P0 613 aa5.66□□□□□ -1.5
VPS26A-206ENST00000489794 RTP4Q96DX8 246 aa5.66□□□□□ -1.5
VPS26A-206ENST00000489794 MED30Q96HR3 178 aa5.66□□□□□ -1.5
VPS26A-206ENST00000489794 FIZ1Q96SL8 496 aa5.66□□□□□ -1.5
VPS26A-206ENST00000489794 C1QTNF1Q9BXJ1 281 aa5.66□□□□□ -1.5
VPS26A-206ENST00000489794 SIL1Q9H173 461 aa5.66□□□□□ -1.5
VPS26A-206ENST00000489794 MAGIXQ9H6Y5 334 aa5.66□□□□□ -1.5
VPS26A-206ENST00000489794 SLC28A3Q9HAS3 691 aa5.66□□□□□ -1.5
VPS26A-206ENST00000489794 MCM9Q9NXL9 1143 aa5.66□□□□□ -1.5
VPS26A-206ENST00000489794 FRMD3A2A2Y4 597 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 VCYO14598 125 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 TSPAN9O75954 239 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 G6PDP11413 515 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 ALOX12P18054 663 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 HNRNPH2P55795 449 aaKnown RBP5.65□□□□□ -1.5
VPS26A-206ENST00000489794 BNC1Q01954 994 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 FOXM1Q08050 763 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 TRAF3Q13114 568 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 PRKG2Q13237 762 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 PDE1CQ14123 709 aaPredicted RBP5.65□□□□□ -1.5
VPS26A-206ENST00000489794 DHX34Q14147 1143 aaKnown RBP5.65□□□□□ -1.5
VPS26A-206ENST00000489794 OASLQ15646 514 aaKnown RBP5.65□□□□□ -1.5
VPS26A-206ENST00000489794 CDONQ4KMG0 1287 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 SLC36A4Q6YBV0 504 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 BRINP3Q76B58 766 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 PCGF5Q86SE9 256 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 ADGRF2Q8IZF7 708 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 TMTC2Q8N394 836 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 OR14L1PQ8NHC6 308 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 TMED6Q8WW62 240 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 NEUROG1Q92886 237 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 ZNF385AQ96PM9 386 aaKnown RBP5.65□□□□□ -1.5
VPS26A-206ENST00000489794 SMARCAD1Q9H4L7 1026 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 MMP25Q9NPA2 562 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 ACSS1Q9NUB1 689 aaPredicted RBP5.65□□□□□ -1.5
VPS26A-206ENST00000489794 NSMCE4AQ9NXX6 385 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 SMARCAL1Q9NZC9 954 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 SLC9A2Q9UBY0 812 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 FBXW11Q9UKB1 542 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 ACSL5Q9ULC5 683 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 SNX9Q9Y5X1 595 aa5.65□□□□□ -1.5
VPS26A-206ENST00000489794 KANSL1LA0AUZ9 987 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 PTGES3LE9PB15 166 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 HIST1H2ABP04908 130 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 RARGP13631 454 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 HIST1H2ADP20671 130 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 CDH8P55286 799 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 DSCR9P59020 149 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 KRTAP10-11P60412 298 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 ACSM2AQ08AH3 577 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 EIF2S3LQ2VIR3 472 aaKnown RBP5.64□□□□□ -1.51
VPS26A-206ENST00000489794 GKAP1Q5VSY0 366 aaPredicted RBP5.64□□□□□ -1.51
VPS26A-206ENST00000489794 WDR78Q5VTH9 848 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 ACSM2BQ68CK6 577 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 CCNI2Q6ZMN8 369 aaPredicted RBP5.64□□□□□ -1.51
VPS26A-206ENST00000489794 HIST3H2AQ7L7L0 130 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 FASTKD5Q7L8L6 764 aaKnown RBP5.64□□□□□ -1.51
VPS26A-206ENST00000489794 EPHX4Q8IUS5 362 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 ADHFE1Q8IWW8 467 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 WDTC1Q8N5D0 677 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 C9orf106Q8NAJ2 232 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 NAF1Q96HR8 494 aaKnown RBP5.64□□□□□ -1.51
VPS26A-206ENST00000489794 TAF1P21675 1872 aa5.64□□□□□ -1.51
VPS26A-206ENST00000489794 IGKV2D-30A0A075B6S6 120 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 A6NCN8 305 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 CDRT15L2A8MXV6 281 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 SOCS6O14544 535 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 VILLO15195 856 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 SPINT2O43291 252 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 HS6ST1O60243 411 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 DOK2O60496 412 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 GPC4O75487 556 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 BDKRB2P30411 391 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 MAPK4P31152 587 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 CCKARP32238 428 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 GALCP54803 685 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 TAS2R40P59535 323 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 MYBPHQ13203 477 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 MAD2L1Q13257 205 aaPredicted RBP5.63□□□□□ -1.51
VPS26A-206ENST00000489794 TNFAIP1Q13829 316 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 DCST1Q5T197 706 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 CHST9Q7L1S5 443 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 GLCCI1Q86VQ1 547 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 CHERPQ8IWX8 916 aaKnown RBP5.63□□□□□ -1.51
VPS26A-206ENST00000489794 PGBD5Q8N414 524 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 DNAAF4Q8WXU2 420 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 PPP1R13BQ96KQ4 1090 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 BARD1Q99728 777 aaKnown RBP5.63□□□□□ -1.51
VPS26A-206ENST00000489794 SDF4Q9BRK5 362 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 KCNN2Q9H2S1 579 aa5.63□□□□□ -1.51
VPS26A-206ENST00000489794 HAUS2Q9NVX0 235 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms