RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 TCEA3O75764 348 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 TBX6O95947 436 aaPredicted RBP2.94□□□□□ -1.94
CPSF3-205ENST00000489629 TUBBP07437 444 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 PATE4P0C8F1 98 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 RNF224P0DH78 156 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 PSMC2P35998 433 aaKnown RBP2.94□□□□□ -1.94
CPSF3-205ENST00000489629 PGM1P36871 562 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 GNL1P36915 607 aaPredicted RBP2.94□□□□□ -1.94
CPSF3-205ENST00000489629 MMP14P50281 582 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 TUBB4BP68371 445 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 UBE3AQ05086 875 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 PPP2R5BQ15173 497 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 NFIL3Q16649 462 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 PDSS1Q5T2R2 415 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 GGNBP1Q5YKI7 109 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 QSOX2Q6ZRP7 698 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 OR10V1Q8NGI7 309 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 RHBDF1Q96CC6 855 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 RIC8AQ9NPQ8 531 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.94□□□□□ -1.94
CPSF3-205ENST00000489629 CNOT7Q9UIV1 285 aaKnown RBP2.94□□□□□ -1.94
CPSF3-205ENST00000489629 A4GNTQ9UNA3 340 aa2.94□□□□□ -1.94
CPSF3-205ENST00000489629 COL2A1P02458 1487 aaPredicted RBP2.93□□□□□ -1.94
CPSF3-205ENST00000489629 SEC14L5O43304 696 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 ZNF500O60304 480 aaPredicted RBP2.93□□□□□ -1.94
CPSF3-205ENST00000489629 GABRB2P47870 512 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 HOXA1P49639 335 aaPredicted RBP2.93□□□□□ -1.94
CPSF3-205ENST00000489629 KRTAP10-3P60369 221 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 EEF1A1P68104 462 aaKnown RBP2.93□□□□□ -1.94
CPSF3-205ENST00000489629 RPL24P83731 157 aaKnown RBP2.93□□□□□ -1.94
CPSF3-205ENST00000489629 GAGE5Q13069 117 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 GAGE6Q13070 117 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 NAE1Q13564 534 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 ZNF234Q14588 700 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 SIRPB2Q5JXA9 342 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 EEF1A1P5Q5VTE0 462 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 SLC35E4Q6ICL7 350 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 ZNF280DQ6N043 979 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 DUS1LQ6P1R4 473 aaKnown RBP2.93□□□□□ -1.94
CPSF3-205ENST00000489629 BRAT1Q6PJG6 821 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 SLC22A25Q6T423 547 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 LDHAL6AQ6ZMR3 332 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 PCDH20Q8N6Y1 951 aaKnown RBP2.93□□□□□ -1.94
CPSF3-205ENST00000489629 TRIM58Q8NG06 486 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 OR5R1Q8NH85 324 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 PIGTQ969N2 578 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 PABPC5Q96DU9 382 aaKnown RBP2.93□□□□□ -1.94
CPSF3-205ENST00000489629 SCRN2Q96FV2 425 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 FUZQ9BT04 418 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 POLR3CQ9BUI4 534 aaPredicted RBP2.93□□□□□ -1.94
CPSF3-205ENST00000489629 FAM118AQ9NWS6 357 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 SCINQ9Y6U3 715 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 KIAA1210Q9ULL0 1709 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 PTPRCP08575 1304 aa2.93□□□□□ -1.94
CPSF3-205ENST00000489629 IGKV3D-15A0A087WSY6 115 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 DVL1O14640 695 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 LDLRAD4O15165 306 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 LDHAP00338 332 aaKnown RBP2.92□□□□□ -1.94
CPSF3-205ENST00000489629 IGHV4-39P01824 125 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 INHBAP08476 426 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 IRF1P10914 325 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 COX7A2P14406 83 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 FASLGP48023 281 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 DVL1P1P54792 670 aaPredicted RBP2.92□□□□□ -1.94
CPSF3-205ENST00000489629 UFM1P61960 85 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 SORDQ00796 357 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 RUNX1T1Q06455 604 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 CCDC96Q2M329 555 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 ZNF876PQ49A33 203 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 FRG2Q64ET8 278 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 SLC46A3Q7Z3Q1 461 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 NOTCH2NLQ7Z3S9 236 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 HAPLN4Q86UW8 402 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 NRROSQ86YC3 692 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 BEST3Q8N1M1 668 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 CNBD1Q8NA66 436 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 ZCCHC10Q8TBK6 192 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 ZBTB10Q96DT7 871 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 ST6GAL2Q96JF0 529 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 PPP1R13BQ96KQ4 1090 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 NEURL2Q9BR09 285 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 H2AFJQ9BTM1 129 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 PADI3Q9ULW8 664 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 FAF1Q9UNN5 650 aaPredicted RBP2.92□□□□□ -1.94
CPSF3-205ENST00000489629 ERVK-11Q9UQG0 969 aa2.92□□□□□ -1.94
CPSF3-205ENST00000489629 A0A1W2PQM1 296 aa2.91□□□□□ -1.94
CPSF3-205ENST00000489629 ZNHIT1O43257 154 aa2.91□□□□□ -1.94
CPSF3-205ENST00000489629 PRKNO60260 465 aaPredicted RBP2.91□□□□□ -1.94
CPSF3-205ENST00000489629 HOXB5P09067 269 aa2.91□□□□□ -1.94
CPSF3-205ENST00000489629 HSD17B4P51659 736 aa2.91□□□□□ -1.94
CPSF3-205ENST00000489629 TERF1P54274 439 aa2.91□□□□□ -1.94
CPSF3-205ENST00000489629 OS9Q13438 667 aaPredicted RBP2.91□□□□□ -1.94
CPSF3-205ENST00000489629 SLC9B1Q4ZJI4 515 aa2.91□□□□□ -1.94
CPSF3-205ENST00000489629 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
CPSF3-205ENST00000489629 FAM171BQ6P995 826 aa2.91□□□□□ -1.94
CPSF3-205ENST00000489629 SLC27A1Q6PCB7 646 aa2.91□□□□□ -1.94
CPSF3-205ENST00000489629 CEACAM20Q6UY09 585 aa2.91□□□□□ -1.94
CPSF3-205ENST00000489629 PQLC2Q6ZP29 291 aa2.91□□□□□ -1.94
CPSF3-205ENST00000489629 MAPK1IP1LQ8NDC0 245 aa2.91□□□□□ -1.94
CPSF3-205ENST00000489629 CADM4Q8NFZ8 388 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms