RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 PROX2Q3B8N5 592 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 LYSMD3Q7Z3D4 306 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 RD3Q7Z3Z2 195 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 RBFAQ8N0V3 343 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 FAM181AQ8N9Y4 354 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 MAIP1Q8WWC4 291 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 ADAMTS14Q8WXS8 1223 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 LRRC45Q96CN5 670 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 LRRC61Q9BV99 259 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 RIOK2Q9BVS4 552 aaKnown RBP17.29■□□□□ 0.36
MDC1-206ENST00000489540 TCEAL2Q9H3H9 227 aaPredicted RBP17.29■□□□□ 0.36
MDC1-206ENST00000489540 KCNF1Q9H3M0 494 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 CAAP1Q9H8G2 361 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 TOR4AQ9NXH8 423 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 HACD3Q9P035 362 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 SHOC2Q9UQ13 582 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 ZNF711Q9Y462 761 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 JRKLQ9Y4A0 524 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 LMO7DNF2Z398 122 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 DKK1O94907 266 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 FGF1P05230 155 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 PIRTP0C851 137 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 PSMB4P28070 264 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 SHC2P98077 582 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 FOXC1Q12948 553 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 C1orf61Q13536 156 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 GSE1Q14687 1217 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 PARP6Q2NL67 630 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 SIRPB2Q5JXA9 342 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 LVRNQ6Q4G3 990 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 ARHGEF18Q6ZSZ5 1173 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 REXO1L1PQ8IX06 675 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 SLC25A41Q8N5S1 370 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 PNPLA1Q8N8W4 532 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 SCG3Q8WXD2 468 aaKnown RBP17.28■□□□□ 0.36
MDC1-206ENST00000489540 OR1E3Q8WZA6 343 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 EID2BQ96D98 161 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 TMEM121Q9BTD3 319 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 FGF22Q9HCT0 170 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 EVA1BQ9NVM1 165 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 NCKIPSDQ9NZQ3 722 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 ANGPTL2Q9UKU9 493 aa17.28■□□□□ 0.36
MDC1-206ENST00000489540 ANKRD36A6QL64 1941 aa17.27■□□□□ 0.36
MDC1-206ENST00000489540 LIASO43766 372 aa17.27■□□□□ 0.35
MDC1-206ENST00000489540 SOD1P00441 154 aa17.27■□□□□ 0.35
MDC1-206ENST00000489540 AGTP01019 485 aa17.27■□□□□ 0.35
MDC1-206ENST00000489540 ANXA6P08133 673 aa17.27■□□□□ 0.35
MDC1-206ENST00000489540 DUSP3P51452 185 aaPredicted RBP17.27■□□□□ 0.35
MDC1-206ENST00000489540 ILKQ13418 452 aa17.27■□□□□ 0.35
MDC1-206ENST00000489540 HENMT1Q5T8I9 393 aaKnown RBP17.27■□□□□ 0.35
MDC1-206ENST00000489540 ZCCHC8Q6NZY4 707 aaKnown RBP17.27■□□□□ 0.35
MDC1-206ENST00000489540 RAB44Q7Z6P3 723 aaPredicted RBP17.27■□□□□ 0.35
MDC1-206ENST00000489540 GKN2Q86XP6 184 aa17.27■□□□□ 0.35
MDC1-206ENST00000489540 GLMNQ92990 594 aa17.27■□□□□ 0.35
MDC1-206ENST00000489540 HIC2Q96JB3 615 aa17.27■□□□□ 0.35
MDC1-206ENST00000489540 WDR24Q96S15 920 aa17.27■□□□□ 0.35
MDC1-206ENST00000489540 GORASP1Q9BQQ3 440 aa17.27■□□□□ 0.35
MDC1-206ENST00000489540 FRMD8Q9BZ67 464 aaPredicted RBP17.27■□□□□ 0.35
MDC1-206ENST00000489540 CYP4F12Q9HCS2 524 aa17.27■□□□□ 0.35
MDC1-206ENST00000489540 MOSPD1Q9UJG1 213 aa17.27■□□□□ 0.35
MDC1-206ENST00000489540 DOLKQ9UPQ8 538 aa17.27■□□□□ 0.35
MDC1-206ENST00000489540 ZKSCAN5Q9Y2L8 839 aa17.27■□□□□ 0.35
MDC1-206ENST00000489540 NCOR2Q9Y618 2525 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 TMEM131Q92545 1883 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 PRSS38A1L453 326 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 YY2O15391 372 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 CEACAM5P06731 702 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 CKMT1AP12532 417 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 ACP1P24666 158 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 MSNP26038 577 aaKnown RBP17.26■□□□□ 0.35
MDC1-206ENST00000489540 ADRA1AP35348 466 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 HMGCLP35914 325 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 CHRNA4P43681 627 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 DCDC1P59894 354 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 DAB2P98082 770 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 DEFB133Q30KQ1 61 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 P3H1Q32P28 736 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 RANBP10Q6VN20 620 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 CHCHD4Q8N4Q1 142 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 C1orf54Q8WWF1 131 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 ATG4AQ8WYN0 398 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 RTP4Q96DX8 246 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 PDXPQ96GD0 296 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 APOLD1Q96LR9 279 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 AGAP2Q99490 1192 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 FICDQ9BVA6 458 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 CLPBQ9H078 707 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 MRPL40Q9NQ50 206 aaKnown RBP17.26■□□□□ 0.35
MDC1-206ENST00000489540 NFKBIL1Q9UBC1 381 aaPredicted RBP17.26■□□□□ 0.35
MDC1-206ENST00000489540 WASF3Q9UPY6 502 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 ZNF148Q9UQR1 794 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 SLC17A4Q9Y2C5 497 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 SPO11Q9Y5K1 396 aa17.26■□□□□ 0.35
MDC1-206ENST00000489540 PSMD3O43242 534 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 CEP104O60308 925 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 FGGP02679 453 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 IVLP07476 585 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 RPIAP49247 311 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 ACADVLP49748 655 aa17.25■□□□□ 0.35
MDC1-206ENST00000489540 DNAJC3Q13217 504 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 393 ms