RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 STN1Q9H668 368 aaKnown RBP9.1□□□□□ -0.95
HDAC6-232ENST00000489053 MRPL40Q9NQ50 206 aaKnown RBP9.1□□□□□ -0.95
HDAC6-232ENST00000489053 AKAP7Q9P0M2 348 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-232ENST00000489053 TMEM131Q92545 1883 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 SPEGQ15772 3267 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 ACACAQ13085 2346 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 CHD5Q8TDI0 1954 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 APC2O95996 2303 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 FAM208BQ5VWN6 2430 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 C3orf70A6NLC5 250 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-232ENST00000489053 HACD1B0YJ81 288 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 ANKRD66B4E2M5 251 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 INPP4BO15327 924 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 ZNF189O75820 626 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-232ENST00000489053 CLDN7O95471 211 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 RPLP0P05388 317 aaKnown RBP9.09□□□□□ -0.95
HDAC6-232ENST00000489053 VAV2P52735 878 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 STC1P52823 247 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 RWDD2BP57060 319 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 COPS2P61201 443 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 SKOR1P84550 965 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 PTSQ03393 145 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 DPTQ07507 201 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 PRPSAP1Q14558 356 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 PPP2R5EQ16537 467 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 QPCTQ16769 361 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 TEX44Q53QW1 395 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 ZNF569Q5MCW4 686 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 ALS2CLQ60I27 953 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 ITPRIPL1Q6GPH6 555 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 PEX26Q7Z412 305 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 CDKL3Q8IVW4 592 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-232ENST00000489053 RAVER1Q8IY67 606 aaKnown RBP9.09□□□□□ -0.95
HDAC6-232ENST00000489053 ARL14Q8N4G2 192 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 ARRDC2Q8TBH0 407 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 HTR3CQ8WXA8 447 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 SCAMP4Q969E2 229 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 IMP4Q96G21 291 aaKnown RBP9.09□□□□□ -0.95
HDAC6-232ENST00000489053 HIC2Q96JB3 615 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 OLFM3Q96PB7 478 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 OR2M4Q96R27 311 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 VAT1Q99536 393 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 LGR4Q9BXB1 951 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 SPATA16Q9BXB7 569 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 TEX101Q9BY14 249 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 ABCG8Q9H221 673 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 CAAP1Q9H8G2 361 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 ZFYVE1Q9HBF4 777 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 GLOD4Q9HC38 313 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 EPB41L5Q9HCM4 733 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 TRNAU1APQ9NX07 287 aaKnown RBP9.09□□□□□ -0.95
HDAC6-232ENST00000489053 IMPACTQ9P2X3 320 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 SAE1Q9UBE0 346 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-232ENST00000489053 DKK4Q9UBT3 224 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 FAM153AQ9UHL3 310 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 RSPH14Q9UHP6 348 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 ZNHIT2Q9UHR6 403 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 TRHDEQ9UKU6 1024 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 AMFRQ9UKV5 643 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 SUFUQ9UMX1 484 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 TFR2Q9UP52 801 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 SHOC2Q9UQ13 582 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 TMEM98Q9Y2Y6 226 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 PPIL1Q9Y3C6 166 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 COL5A1P20908 1838 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-232ENST00000489053 CFAP47Q6ZTR5 3102 aa9.09□□□□□ -0.95
HDAC6-232ENST00000489053 NBEAQ8NFP9 2946 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 hCG_1818297A0A087WSY0 165 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 F5H423 210 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-232ENST00000489053 APOC4-APOC2K7ER74 178 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 FZD6O60353 706 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 BRINP1O60477 761 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 TJP3O95049 919 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 NDST3O95803 873 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 APOC2P02655 101 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 CEACAM5P06731 702 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 IVLP07476 585 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 GIMD1P0DJR0 217 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 SLC2A4P14672 509 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 GLB1P16278 677 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 PECAM1P16284 738 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-232ENST00000489053 PTPN3P26045 913 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 CDC25BP30305 580 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 ACTR1BP42025 376 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 ABCG1P45844 678 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 POLD2P49005 469 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 PCBP4P57723 403 aaKnown RBP9.08□□□□□ -0.96
HDAC6-232ENST00000489053 ACTR1AP61163 376 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 CAMK2BQ13554 666 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 GTF2H3Q13889 308 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 LRP8Q14114 963 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 PRKD1Q15139 912 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-232ENST00000489053 PTPRRQ15256 657 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 SLC14A2Q15849 920 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 ISXQ2M1V0 245 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 AMZ1Q400G9 498 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 MAP9Q49MG5 647 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 C14orf28Q4W4Y0 310 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 C3orf38Q5JPI3 329 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 PERM1Q5SV97 790 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms