RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 RNF11Q9Y3C5 154 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 PCDHGC4Q9Y5F7 938 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 hCG_2014768A0A024R1R8 64 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 SUPT3HB4E1H0 165 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 SOCS2O14508 198 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 VILLO15195 856 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 SLC7A4O43246 635 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 DENRO43583 198 aaKnown RBP12.66□□□□□ -0.38
CLIC4-202ENST00000488683 RAMP2O60895 175 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 SUPT3HO75486 399 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 PAPSS2O95340 614 aaPredicted RBP12.66□□□□□ -0.38
CLIC4-202ENST00000488683 CLPTM1O96005 669 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 SNRPB2P08579 225 aaKnown RBP12.66□□□□□ -0.38
CLIC4-202ENST00000488683 RBP1P09455 135 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 IRF1P10914 325 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 CD1DP15813 335 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 ARL1P40616 181 aaPredicted RBP12.66□□□□□ -0.38
CLIC4-202ENST00000488683 ROR2Q01974 943 aaKnown RBP12.66□□□□□ -0.38
CLIC4-202ENST00000488683 SEMG2Q02383 582 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 DUSP4Q13115 394 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 TRIM25Q14258 630 aaKnown RBP12.66□□□□□ -0.38
CLIC4-202ENST00000488683 SQLEQ14534 574 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 TSNQ15631 228 aaKnown RBP12.66□□□□□ -0.38
CLIC4-202ENST00000488683 ZFP1Q6P2D0 407 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 RNF19BQ6ZMZ0 732 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 LGI2Q8N0V4 545 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 TEX26Q8N6G2 289 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 EFHBQ8N7U6 833 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 DNAJB14Q8TBM8 379 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 TADA1Q96BN2 335 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 MAP10Q9P2G4 905 aa12.66□□□□□ -0.38
CLIC4-202ENST00000488683 ZFC3H1O60293 1989 aaKnown RBP12.66□□□□□ -0.38
CLIC4-202ENST00000488683 IGLV3-10A0A075B6K4 115 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 A0A0J9YYE9 177 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 LOC285095A0A1B0GVY8 99 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 NPEPPSL1A6NEC2 478 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 H3BSA7 217 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 NME4O00746 187 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 TRIM24O15164 1050 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 MTHFD2P13995 350 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 ZNF26P17031 533 aaPredicted RBP12.65□□□□□ -0.38
CLIC4-202ENST00000488683 IMPDH1P20839 514 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 OXTRP30559 389 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 INHBCP55103 352 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 TRIM71Q2Q1W2 868 aaKnown RBP12.65□□□□□ -0.38
CLIC4-202ENST00000488683 UGT3A2Q3SY77 523 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 RABL3Q5HYI8 236 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 ARMC3Q5W041 872 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 PRSS55Q6UWB4 352 aaPredicted RBP12.65□□□□□ -0.38
CLIC4-202ENST00000488683 LARP4Q71RC2 724 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLIC4-202ENST00000488683 TUBGCP3Q96CW5 907 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 RMDN1Q96DB5 314 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 ASB9Q96DX5 294 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 TMEM74Q96NL1 305 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 CAAP1Q9H8G2 361 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 EML4Q9HC35 981 aaKnown RBP12.65□□□□□ -0.38
CLIC4-202ENST00000488683 GKN1Q9NS71 199 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 CNOT6Q9ULM6 557 aaKnown RBP12.65□□□□□ -0.38
CLIC4-202ENST00000488683 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.65□□□□□ -0.38
CLIC4-202ENST00000488683 A8MX80 341 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 AKAP10O43572 662 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 NRP2O60462 931 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 OAZ2O95190 189 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 GJB5O95377 273 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 GLP2RO95838 553 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 EEF1DP29692 281 aaKnown RBP12.65□□□□□ -0.38
CLIC4-202ENST00000488683 DSC1Q08554 894 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 OR4K2Q8NGD2 314 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 ZFP28Q8NHY6 868 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 TWIST2Q8WVJ9 160 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 WBP2Q969T9 261 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 CCDC126Q96EE4 140 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 TSPAN17Q96FV3 270 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 TANC1Q9C0D5 1861 aa12.65□□□□□ -0.38
CLIC4-202ENST00000488683 ARHGAP10A1A4S6 786 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 MANSC4A6NHS7 340 aaPredicted RBP12.64□□□□□ -0.39
CLIC4-202ENST00000488683 ADAM12O43184 909 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 AP1G1O43747 822 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 BAIAP3O94812 1187 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 ITGB6P18564 788 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 ZNF235Q14590 738 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 SETMARQ53H47 684 aaPredicted RBP12.64□□□□□ -0.39
CLIC4-202ENST00000488683 KLHDC10Q6PID8 442 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 CPNE9Q8IYJ1 553 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 COLGALT2Q8IYK4 626 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 MDGA1Q8NFP4 955 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 OR6K2Q8NGY2 324 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 UNC93B1Q9H1C4 597 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 SPC25Q9HBM1 224 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 CHD5Q8TDI0 1954 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 CLASP2O75122 1294 aaKnown RBP12.64□□□□□ -0.39
CLIC4-202ENST00000488683 NIPSNAP2O75323 286 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 SNUPNO95149 360 aaKnown RBP12.64□□□□□ -0.39
CLIC4-202ENST00000488683 VNN2O95498 520 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 CAPNS1P04632 268 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 PABPC4LP0CB38 370 aaKnown RBP12.64□□□□□ -0.39
CLIC4-202ENST00000488683 HGFP14210 728 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 GPX3P22352 226 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 FDXRP22570 491 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 ZBTB46Q86UZ6 589 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms