RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 OR6K2Q8NGY2 324 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 LRRC8CQ8TDW0 803 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 CSGALNACT1Q8TDX6 532 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 CDKN2AIPNLQ96HQ2 116 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 FAM107BQ9H098 131 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 RABEP2Q9H5N1 569 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 HECAQ9UBI9 543 aaPredicted RBP12.71□□□□□ -0.37
NELFE-209ENST00000488426 CORO1CQ9ULV4 474 aaPredicted RBP12.71□□□□□ -0.37
NELFE-209ENST00000488426 SLC8A2Q9UPR5 921 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 ANKRD6Q9Y2G4 727 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 ZNF711Q9Y462 761 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 OTOGLQ3ZCN5 2332 aa12.71□□□□□ -0.38
NELFE-209ENST00000488426 KIAA1549LQ6ZVL6 1849 aa12.71□□□□□ -0.38
NELFE-209ENST00000488426 A0A096LPK6 155 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 FAM95CA0A1B0GW59 222 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 PRR23AA6NEV1 266 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 WASH3PC4AMC7 463 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 H7C0S8 307 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 AURKAO14965 403 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 PIGNO95427 931 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 SLC8A1P32418 973 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 ABL2P42684 1182 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 ABCG1P45844 678 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 SERPINB4P48594 390 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 CCNHP51946 323 aaPredicted RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 TMPRSS15P98073 1019 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 POU4F1Q01851 419 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 CSTF1Q05048 431 aaKnown RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 USP10Q14694 798 aaKnown RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 PON2Q15165 354 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 ZSCAN26Q16670 478 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 CMC1Q7Z7K0 106 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 TRIM42Q8IWZ5 723 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 OR4L1Q8NH43 312 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 ECHDC3Q96DC8 303 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 ZNF641Q96N77 438 aaPredicted RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 NELL2Q99435 816 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 CATSPERZQ9NTU4 200 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 POLR3BQ9NW08 1133 aaPredicted RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 SLC39A10Q9ULF5 831 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 A0A0J9YYE9 177 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 CCL22O00626 93 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 MAN2B1O00754 1011 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 STX7O15400 261 aaKnown RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 CD3EAPO15446 510 aaKnown RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 BUD23O43709 281 aaKnown RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 TULP3O75386 442 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 HAUS5O94927 633 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 TRBC1P01850 177 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 C2P06681 752 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 DLDP09622 509 aaKnown RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 CRABP2P29373 138 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 RECQLP46063 649 aaPredicted RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 TYSND1Q2T9J0 566 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 TAF1BQ53T94 588 aaPredicted RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 GKAP1Q5VSY0 366 aaPredicted RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 SDCCAG8Q86SQ7 713 aaPredicted RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 CLEC14AQ86T13 490 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 PAF1Q8N7H5 531 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 MRGPRX3Q96LB0 322 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 IRF2BPLQ9H1B7 796 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 C12orf65Q9H3J6 166 aaKnown RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 ECT2Q9H8V3 914 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 CAB39LQ9H9S4 337 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 FBXO6Q9NRD1 293 aaPredicted RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 MARCH4Q9P2E8 410 aaPredicted RBP12.7□□□□□ -0.38
NELFE-209ENST00000488426 SLCO3A1Q9UIG8 710 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 TLK1Q9UKI8 766 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 PHTF1Q9UMS5 762 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 PKP3Q9Y446 797 aa12.7□□□□□ -0.38
NELFE-209ENST00000488426 ZNF106Q9H2Y7 1883 aaKnown RBP12.69□□□□□ -0.38
NELFE-209ENST00000488426 FANCMQ8IYD8 2048 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 OR51F1A6NGY5 319 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 CAPN8A6NHC0 703 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 BIRC5O15392 142 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 S1PR4O95977 384 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 F7P08709 466 aaPredicted RBP12.69□□□□□ -0.38
NELFE-209ENST00000488426 COL6A2P12110 1019 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 STMN1P16949 149 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 HMGCLP35914 325 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 RPS9P46781 194 aaKnown RBP12.69□□□□□ -0.38
NELFE-209ENST00000488426 RAB10P61026 200 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 RUNX3Q13761 415 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 PTPRCAPQ14761 206 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 EIF4HQ15056 248 aaKnown RBP12.69□□□□□ -0.38
NELFE-209ENST00000488426 ZKSCAN8Q15776 578 aaPredicted RBP12.69□□□□□ -0.38
NELFE-209ENST00000488426 GAB4Q2WGN9 574 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 CCDC153Q494R4 210 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 FASTKD1Q53R41 847 aaKnown RBP12.69□□□□□ -0.38
NELFE-209ENST00000488426 PPM1JQ5JR12 505 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 N4BP2L1Q5TBK1 243 aaPredicted RBP12.69□□□□□ -0.38
NELFE-209ENST00000488426 CNSTQ6PJW8 725 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 DPY19L3Q6ZPD9 716 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 Q6ZVU0 165 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 CCDC91Q7Z6B0 441 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 C12orf40Q86WS4 652 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 CPA6Q8N4T0 437 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 ARMC2Q8NEN0 867 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 RAB3IL1Q8TBN0 382 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms