RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 CDC14AQ9UNH5 594 aa3.81□□□□□ -1.8
HMGB1P36-201ENST00000487709 GPR34Q9UPC5 381 aa3.81□□□□□ -1.8
HMGB1P36-201ENST00000487709 PTGDR2Q9Y5Y4 395 aa3.81□□□□□ -1.8
HMGB1P36-201ENST00000487709 CEPT1Q9Y6K0 416 aa3.81□□□□□ -1.8
HMGB1P36-201ENST00000487709 STON1Q9Y6Q2 735 aa3.81□□□□□ -1.8
HMGB1P36-201ENST00000487709 FAM237AA0A1B0GTK4 181 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 BECN2A8MW95 431 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 TGFB1I1O43294 461 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 PTP4A3O75365 173 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 JRKO75564 520 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 CAMTA2O94983 1202 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 SOX30O94993 753 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 MLYCDO95822 493 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 HIST1H2ABP04908 130 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 CLTBP09497 229 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 IL7RP16871 459 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 HIST1H2ADP20671 130 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 SAT1P21673 171 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 UBA1P22314 1058 aaKnown RBP3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 ARRB2P32121 409 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 LMAN1P49257 510 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 METAP2P50579 478 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 HILS1P60008 231 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 MRPS34P82930 218 aaKnown RBP3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 CTTNQ14247 550 aaKnown RBP3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 MYBPC2Q14324 1141 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 NFATC4Q14934 902 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 MEA1Q16626 185 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 ALG11Q2TAA5 492 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 PCGF3Q3KNV8 242 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 MMEL1Q495T6 779 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 GPATCH4Q5T3I0 446 aaKnown RBP3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 GKAP1Q5VSY0 366 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 FBXL22Q6P050 247 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 CFAP161Q6P656 301 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 HIST3H2AQ7L7L0 130 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 TAOK1Q7L7X3 1001 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 ZC3HC1Q86WB0 502 aaKnown RBP3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 CCDC13Q8IYE1 715 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 C17orf53Q8N3J3 647 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 GPT2Q8TD30 523 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 OIT3Q8WWZ8 545 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 NEUROG1Q92886 237 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 MIB2Q96AX9 1013 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 SAT2Q96F10 170 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 MED30Q96HR3 178 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 FEM1CQ96JP0 617 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 C17orf75Q9HAS0 396 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 TERF2IPQ9NYB0 399 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 ABI3Q9P2A4 366 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 FBXW11Q9UKB1 542 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 ZNF215Q9UL58 517 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 SLC45A1Q9Y2W3 748 aa3.8□□□□□ -1.8
HMGB1P36-201ENST00000487709 ZNF644Q9H582 1327 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 CKAP5Q14008 2032 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 A0A1B0GVT2 93 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 KANSL1LA0AUZ9 987 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 B4DLN1 442 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 I6L893 689 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 HS3ST1O14792 307 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 TIMM23O14925 209 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 ZIC3O60481 467 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 GLUD1P00367 558 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 FGF3P11487 239 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 MAOAP21397 527 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 HOXA11P31270 313 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 HNRNPH1P31943 449 aaKnown RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 PIGAP37287 484 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 GLUD2P49448 558 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 PCYT1AP49585 367 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 CXCR3P49682 368 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 MRPL12P52815 198 aaKnown RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 GALCP54803 685 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 CSNK2A1P68400 391 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 CEBPZQ03701 1054 aaKnown RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 FOXM1Q08050 763 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 MAD2L1Q13257 205 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 CALCRLQ16602 461 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 ODF3L2Q3SX64 289 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 SGO1Q5FBB7 561 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 CXorf66Q5JRM2 361 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 PLEKHS1Q5SXH7 462 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 CFAP58Q5T655 872 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 PLEKHA7Q6IQ23 1121 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 FBXO46Q6PJ61 603 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 CLEC4GQ6UXB4 293 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 PQLC2Q6ZP29 291 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 QSOX2Q6ZRP7 698 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 SEPT14Q6ZU15 432 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 MTSS1LQ765P7 747 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 CHST9Q7L1S5 443 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 WDTC1Q8N5D0 677 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 CSNK2A3Q8NEV1 391 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 WFIKKN2Q8TEU8 576 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 CREB3L4Q8TEY5 395 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 TMEM255BQ8WV15 326 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 NUDCD2Q8WVJ2 157 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 NSUN4Q96CB9 384 aaKnown RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 URB1-AS1Q96HZ7 61 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms