RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 RHPN2P1A8MT19 583 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 C9orf172C9J069 976 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 GOLGA6L22H0YM25 854 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 DDX3XO00571 662 aaKnown RBP eCLIP8.52□□□□□ -1.05
PRKCB-208ENST00000487674 MAFKO60675 156 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 PGLSO95336 258 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 FGF1P05230 155 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 CEACAM5P06731 702 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 IVLP07476 585 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 IL1R2P27930 398 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 SERPINB6P35237 376 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 ETV3P41162 512 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 MMP13P45452 471 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 GPR3P46089 330 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 GNPDA1P46926 289 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 MAPK10P53779 464 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 CDH6P55285 790 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 TYRO3Q06418 890 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 TRAF2Q12933 501 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 SRSF6Q13247 344 aaKnown RBP8.52□□□□□ -1.05
PRKCB-208ENST00000487674 BIRC2Q13490 618 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 PEX6Q13608 980 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 C16orf72Q14CZ0 275 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 SMTNL2Q2TAL5 461 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 AMZ1Q400G9 498 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 CCDC183Q5T5S1 534 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 TMEM164Q5U3C3 297 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 E4F1Q66K89 784 aaPredicted RBP8.52□□□□□ -1.05
PRKCB-208ENST00000487674 DENND2CQ68D51 928 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 RAET1GQ6H3X3 334 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 SLC30A9Q6PML9 568 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 HSD11B1LQ7Z5J1 315 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 POLNQ7Z5Q5 900 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 VASH2Q86V25 355 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 ZFAND4Q86XD8 727 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 DTX1Q86Y01 620 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 NRROSQ86YC3 692 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 CBARPQ8N350 705 aaPredicted RBP8.52□□□□□ -1.05
PRKCB-208ENST00000487674 PGBD5Q8N414 524 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 ZSCAN1Q8NBB4 408 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 NSMCE1Q8WV22 266 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 USP7Q93009 1102 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 SCRN2Q96FV2 425 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 MRGPRX2Q96LB1 330 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 CSPG4P5Q96PW8 444 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 NUDT22Q9BRQ3 303 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 CDH19Q9H159 772 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 CLMPQ9H6B4 373 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 SUDS3Q9H7L9 328 aaPredicted RBP8.52□□□□□ -1.05
PRKCB-208ENST00000487674 RDH14Q9HBH5 336 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 NOD2Q9HC29 1040 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.52□□□□□ -1.05
PRKCB-208ENST00000487674 SPATS2LQ9NUQ6 558 aaKnown RBP8.52□□□□□ -1.05
PRKCB-208ENST00000487674 ETNK2Q9NVF9 386 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 SUFUQ9UMX1 484 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 SLC17A4Q9Y2C5 497 aa8.52□□□□□ -1.05
PRKCB-208ENST00000487674 ZFC3H1O60293 1989 aaKnown RBP8.52□□□□□ -1.05
PRKCB-208ENST00000487674 IGHV5-10-1A0A0J9YXX1 117 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 GOLGA6CA6NDK9 693 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 GOLGA6BA6NDN3 693 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 STMND1H3BQB6 276 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 AGRPO00253 132 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 B4GAT1O43505 415 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 WIPF1O43516 503 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 ECEL1O95672 775 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 MBD3O95983 291 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 FUCA1P04066 466 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 GOLGA6DP0CG33 693 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 KRT10P13645 584 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 TCF4P15884 667 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 AMPD1P23109 780 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 AK4P27144 223 aaPredicted RBP8.51□□□□□ -1.05
PRKCB-208ENST00000487674 ALDH4A1P30038 563 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 OR1D5P58170 312 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 MAXP61244 160 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 CTBSQ01459 385 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 DPTQ07507 201 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 KLHL30Q0D2K2 578 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 NFATC3Q12968 1075 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 TRA2AQ13595 282 aaKnown RBP eCLIP8.51□□□□□ -1.05
PRKCB-208ENST00000487674 PIGHQ14442 188 aaPredicted RBP8.51□□□□□ -1.05
PRKCB-208ENST00000487674 LINC00303Q3SY05 128 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 FILIP1LQ4L180 1135 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 BOLA3Q53S33 107 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 ARMC12Q5T9G4 340 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 MARC1Q5VT66 337 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 ADAMTSL4Q6UY14 1074 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 Q6ZVL8 140 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 PRICKLE2Q7Z3G6 844 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 TSPAN33Q86UF1 283 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 NIPA2Q8N8Q9 360 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 EXD3Q8N9H8 876 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 CCDC112Q8NEF3 446 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 OR4D9Q8NGE8 314 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 TEKT4Q8WW24 435 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 HSPH1Q92598 858 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 EXTL1Q92935 676 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 SCARF2Q96GP6 870 aaPredicted RBP8.51□□□□□ -1.05
PRKCB-208ENST00000487674 CCDC74BQ96LY2 380 aa8.51□□□□□ -1.05
PRKCB-208ENST00000487674 OR2M4Q96R27 311 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms