RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 KMT2BQ9UMN6 2715 aaPredicted RBP20.36■□□□□ 0.85
HDAC4-209ENST00000487617 PJA2O43164 708 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 MTSS1O43312 755 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 SOD1P00441 154 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 PYGLP06737 847 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 GNPDA1P46926 289 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 DOK6Q6PKX4 331 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 ADAMTSL4Q6UY14 1074 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 NLRP8Q86W28 1048 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 TMEM139Q8IV31 216 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 SPATA22Q8NHS9 363 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 CCL4L1Q8NHW4 92 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 KIAA1524Q8TCG1 905 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 CCHCR1Q8TD31 782 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 TADA1Q96BN2 335 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 TEKT5Q96M29 485 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 TRIB3Q96RU7 358 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 AGAP2Q99490 1192 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 SUFUQ9UMX1 484 aa20.36■□□□□ 0.85
HDAC4-209ENST00000487617 CSO75390 466 aaKnown RBP20.35■□□□□ 0.85
HDAC4-209ENST00000487617 MT-CYBP00156 380 aaPredicted RBP20.35■□□□□ 0.85
HDAC4-209ENST00000487617 FUCA1P04066 466 aa20.35■□□□□ 0.85
HDAC4-209ENST00000487617 POLD2P49005 469 aa20.35■□□□□ 0.85
HDAC4-209ENST00000487617 COPS2P61201 443 aa20.35■□□□□ 0.85
HDAC4-209ENST00000487617 CDK18Q07002 472 aa20.35■□□□□ 0.85
HDAC4-209ENST00000487617 WASHC5Q12768 1159 aa20.35■□□□□ 0.85
HDAC4-209ENST00000487617 SLC14A2Q15849 920 aa20.35■□□□□ 0.85
HDAC4-209ENST00000487617 CCDC181Q5TID7 509 aa20.35■□□□□ 0.85
HDAC4-209ENST00000487617 BBS12Q6ZW61 710 aa20.35■□□□□ 0.85
HDAC4-209ENST00000487617 RAVER1Q8IY67 606 aaKnown RBP20.35■□□□□ 0.85
HDAC4-209ENST00000487617 HIC2Q96JB3 615 aa20.35■□□□□ 0.85
HDAC4-209ENST00000487617 CCDC3Q9BQI4 270 aa20.35■□□□□ 0.85
HDAC4-209ENST00000487617 PKD2L2Q9NZM6 624 aa20.35■□□□□ 0.85
HDAC4-209ENST00000487617 KLHL8Q9P2G9 620 aaPredicted RBP20.35■□□□□ 0.85
HDAC4-209ENST00000487617 SLC17A4Q9Y2C5 497 aa20.35■□□□□ 0.85
HDAC4-209ENST00000487617 RAXQ9Y2V3 346 aa20.35■□□□□ 0.85
HDAC4-209ENST00000487617 TMEM98Q9Y2Y6 226 aa20.35■□□□□ 0.85
HDAC4-209ENST00000487617 PCDHB1Q9Y5F3 818 aa20.35■□□□□ 0.85
HDAC4-209ENST00000487617 CCDC66A2RUB6 948 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 GRID2IPA4D2P6 1211 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 HACD1B0YJ81 288 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 B4DGG1 531 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 PMPCBO75439 489 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 CTNNA2P26232 953 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 SPINT3P49223 89 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 ILF3Q12906 894 aaKnown RBP eCLIP20.34■□□□□ 0.85
HDAC4-209ENST00000487617 RTP5Q14D33 572 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 CCDC70Q6NSX1 233 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 OGFOD3Q6PK18 319 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 LYSMD3Q7Z3D4 306 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 TRIM74Q86UV6 250 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 GPR156Q8NFN8 814 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 PTCD2Q8WV60 388 aaKnown RBP20.34■□□□□ 0.85
HDAC4-209ENST00000487617 CCDC74AQ96AQ1 378 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 QKIQ96PU8 341 aaKnown RBP eCLIP20.34■□□□□ 0.85
HDAC4-209ENST00000487617 DESI2Q9BSY9 194 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 GSDMCQ9BYG8 508 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 DPEP2Q9H4A9 486 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 ZFYVE1Q9HBF4 777 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 UBP1Q9NZI7 540 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 ASPMQ8IZT6 3477 aa20.34■□□□□ 0.85
HDAC4-209ENST00000487617 LRP4O75096 1905 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 GOLGA6L6A8MZA4 724 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 H7C0C1 242 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 APOC4-APOC2K7ER74 178 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 INPP4BO15327 924 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 APOC2P02655 101 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 IVLP07476 585 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 PIRTP0C851 137 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 NFKB1P19838 968 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 CD68P34810 354 aaPredicted RBP20.33■□□□□ 0.85
HDAC4-209ENST00000487617 ATP5OP48047 213 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 RWDD2BP57060 319 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 KIF5AQ12840 1032 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 RBM44Q6ZP01 1051 aaKnown RBP20.33■□□□□ 0.85
HDAC4-209ENST00000487617 PID1Q7Z2X4 250 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 TXLNBQ8N3L3 684 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 LRRC57Q8N9N7 239 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 OR6C4Q8NGE1 309 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 WDR48Q8TAF3 677 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 GPBAR1Q8TDU6 330 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 HTR3CQ8WXA8 447 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 WDR24Q96S15 920 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 VAT1Q99536 393 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 OSBPL8Q9BZF1 889 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 FAM83DQ9H4H8 585 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 SYNDIG1Q9H7V2 258 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 MAGEE1Q9HCI5 957 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 TRNAU1APQ9NX07 287 aaKnown RBP20.33■□□□□ 0.85
HDAC4-209ENST00000487617 TRIM10Q9UDY6 481 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 FAM153AQ9UHL3 310 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 SHOC2Q9UQ13 582 aa20.33■□□□□ 0.85
HDAC4-209ENST00000487617 MACROD2A1Z1Q3 448 aa20.32■□□□□ 0.84
HDAC4-209ENST00000487617 RGSL1A5PLK6 1076 aa20.32■□□□□ 0.84
HDAC4-209ENST00000487617 F5H423 210 aaPredicted RBP20.32■□□□□ 0.84
HDAC4-209ENST00000487617 NOBOXO60393 691 aa20.32■□□□□ 0.84
HDAC4-209ENST00000487617 USP12O75317 370 aa20.32■□□□□ 0.84
HDAC4-209ENST00000487617 NDST3O95803 873 aa20.32■□□□□ 0.84
HDAC4-209ENST00000487617 SLC4A1P02730 911 aa20.32■□□□□ 0.84
HDAC4-209ENST00000487617 CETN2P41208 172 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms