RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 CSF2P04141 144 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 C1SP09871 688 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 PIRTP0C851 137 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 PYGMP11217 842 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 ZFXP17010 805 aaPredicted RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 TGM2P21980 687 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 CTNNA2P26232 953 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 CD68P34810 354 aaPredicted RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 THOP1P52888 689 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 GSDMDP57764 484 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 POLR2LP62875 67 aaKnown RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 CCZ1BP86790 482 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 CCZ1P86791 482 aaPredicted RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 SHC2P98077 582 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 KIF5AQ12840 1032 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 TFDP2Q14188 446 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 GALNT3Q14435 633 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 SUZ12Q15022 739 aaKnown RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 PPP2R5EQ16537 467 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 PCSK7Q16549 785 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 ALG11Q2TAA5 492 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 INAVAQ3KP66 663 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 C4orf17Q53FE4 359 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 LRRC66Q68CR7 880 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 CRTC1Q6UUV9 634 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 MACC1Q6ZN28 852 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 Q6ZVL8 140 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 USP45Q70EL2 814 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 RAB44Q7Z6P3 723 aaPredicted RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 PHACTR4Q8IZ21 702 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 CBARPQ8N350 705 aaPredicted RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 ZSCAN1Q8NBB4 408 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 TFB1MQ8WVM0 346 aaKnown RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 P3H4Q92791 437 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 TADA1Q96BN2 335 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 NUS1Q96E22 293 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 SCRN2Q96FV2 425 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 IMP4Q96G21 291 aaKnown RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 PDXPQ96GD0 296 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 RBM41Q96IZ5 413 aaKnown RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 CNDP2Q96KP4 475 aaKnown RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 CNTNAP3BQ96NU0 1288 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 QKIQ96PU8 341 aaKnown RBP eCLIP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 TRIB3Q96RU7 358 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 CDC6Q99741 560 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 ANP32EQ9BTT0 268 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 APOOQ9BUR5 198 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 LRRC61Q9BV99 259 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 CNTNAP3Q9BZ76 1288 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 OSBPL8Q9BZF1 889 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 PCDH9Q9HC56 1237 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 FGF22Q9HCT0 170 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 UBP1Q9NZI7 540 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 AMACRQ9UHK6 382 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 CD84Q9UIB8 345 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 ANGPTL2Q9UKU9 493 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 PHTF1Q9UMS5 762 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 PPIL1Q9Y3C6 166 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 U3KQA8 63 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 ANKRD11Q6UB99 2663 aaPredicted RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 KMT2BQ9UMN6 2715 aaPredicted RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 KIF26BQ2KJY2 2108 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 CACNA1BQ00975 2339 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 ZNF106Q9H2Y7 1883 aaKnown RBP7.15□□□□□ -1.26
UBE4B-209ENST00000487244 ACACAQ13085 2346 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 TCRBV7S2A1N4TA0A589 114 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 CCDC66A2RUB6 948 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 CFAP69A5D8W1 941 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 FAM149AA5PLN7 773 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 GOLGA6CA6NDK9 693 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 GOLGA6BA6NDN3 693 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 TMEM202A6NGA9 273 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 APOC4-APOC2K7ER74 178 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 ENC1O14682 589 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 CASC3O15234 703 aaKnown RBP7.15□□□□□ -1.26
UBE4B-209ENST00000487244 AQP9O43315 295 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 PMPCBO75439 489 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 CLDN7O95471 211 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 LDOC1O95751 146 aaPredicted RBP7.15□□□□□ -1.26
UBE4B-209ENST00000487244 SOD1P00441 154 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 APOC2P02655 101 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 GOLGA6DP0CG33 693 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 CYP2A6P11509 494 aaPredicted RBP7.15□□□□□ -1.26
UBE4B-209ENST00000487244 NFKB1P19838 968 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 PTPN7P35236 360 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 NR2C2P49116 596 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 ACADVLP49748 655 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 STC1P52823 247 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 EPHB1P54762 984 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 RWDD2BP57060 319 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 YPEL5P62699 121 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 OTUD4Q01804 1114 aaKnown RBP7.15□□□□□ -1.26
UBE4B-209ENST00000487244 MTM1Q13496 603 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 C1orf61Q13536 156 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 NFATC4Q14934 902 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 NOMO1Q15155 1222 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 DBN1Q16643 649 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 CDKN3Q16667 212 aa7.15□□□□□ -1.26
UBE4B-209ENST00000487244 DEFB133Q30KQ1 61 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms