RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 ERVV-1B6SEH8 477 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 SEC14L5O43304 696 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 ADAM20O43506 726 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 UGDHO60701 494 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 NKX2-2O95096 273 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 CD63P08962 238 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 UBTFL1P0CB47 393 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-216ENST00000487043 SELLP14151 372 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 PTPN2P17706 415 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 GABRB1P18505 474 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 CDAP32320 146 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 CRKLP46109 303 aaKnown RBP4.16□□□□□ -1.74
PTCD3-216ENST00000487043 NRIP1P48552 1158 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 CLCN5P51795 746 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 CLCNKBP51801 687 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 GALCP54803 685 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 GRIK3Q13003 919 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 OLIG2Q13516 323 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 GCKRQ14397 625 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 SUMO4Q6EEV6 95 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 CES5AQ6NT32 575 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 AAGABQ6PD74 315 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 KIF6Q6ZMV9 814 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 TRIM74Q86UV6 250 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 TRIM73Q86UV7 250 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 LINC00346Q8IVM7 164 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 ZCCHC9Q8N567 271 aaKnown RBP4.16□□□□□ -1.74
PTCD3-216ENST00000487043 OR4N2Q8NGD1 307 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 ZC3HAV1LQ96H79 300 aaKnown RBP4.16□□□□□ -1.74
PTCD3-216ENST00000487043 PGAM5Q96HS1 289 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 PRRX2Q99811 253 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 SCNM1Q9BWG6 230 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 APOL6Q9BWW8 343 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 TOR3AQ9H497 397 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 PLEKHA4Q9H4M7 779 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 DCTPP1Q9H773 170 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 WDR6Q9NNW5 1121 aaKnown RBP4.16□□□□□ -1.74
PTCD3-216ENST00000487043 CCDC177Q9NQR7 707 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-216ENST00000487043 MRGBPQ9NV56 204 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 ABI3Q9P2A4 366 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 FBXL17Q9UF56 701 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 TLK1Q9UKI8 766 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 UTS2RQ9UKP6 389 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 ZHX1Q9UKY1 873 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-216ENST00000487043 CARD8Q9Y2G2 431 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 AAR2Q9Y312 384 aaKnown RBP4.16□□□□□ -1.74
PTCD3-216ENST00000487043 FAM169AQ9Y6X4 670 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 MAP3K15Q6ZN16 1313 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 BTAF1O14981 1849 aa4.16□□□□□ -1.74
PTCD3-216ENST00000487043 N4BP2Q86UW6 1770 aaPredicted RBP4.15□□□□□ -1.74
PTCD3-216ENST00000487043 TMEM191CA6NGB0 347 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 KLRF2D3W0D1 207 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 H7C0S8 307 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 RHODO00212 210 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 ATP2C2O75185 946 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 HMMRO75330 724 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 NDUFS3O75489 264 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 SLC25A12O75746 678 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 MT-CYBP00156 380 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-216ENST00000487043 TUBBP07437 444 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 PCNAP12004 261 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 GLULP15104 373 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 WT1P19544 449 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-216ENST00000487043 ITGAXP20702 1163 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 PTGER1P34995 402 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 PIK3CAP42336 1068 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 SLC15A1P46059 708 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 HSD17B4P51659 736 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 SLC12A2P55011 1212 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 MFAP4P55083 255 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 UBXN2AP68543 259 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 DRAP1Q14919 205 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-216ENST00000487043 PLCB4Q15147 1175 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 HLFQ16534 295 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 NTRK2Q16620 822 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 HSP90AB3PQ58FF7 597 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 ALG10Q5BKT4 473 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 ALG10BQ5I7T1 473 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 C1QTNF12Q5T7M4 302 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 GLDNQ6ZMI3 551 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-216ENST00000487043 CLEC17AQ6ZS10 378 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 ZNF34Q8IZ26 560 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 DPP10Q8N608 796 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 MAP4K1Q92918 833 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 SLC22A18Q96BI1 424 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 ELMOD3Q96FG2 381 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 PIMREGQ9BSJ6 248 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 TEX12Q9BXU0 123 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 KLHL4Q9C0H6 718 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 NDST4Q9H3R1 872 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 AAMDCQ9H7C9 122 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 RANGRFQ9HD47 186 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-216ENST00000487043 BPIFA1Q9NP55 256 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 CPSF2Q9P2I0 782 aaKnown RBP4.15□□□□□ -1.75
PTCD3-216ENST00000487043 MORF4L1Q9UBU8 362 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 LAMP3Q9UQV4 416 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 PTRH2Q9Y3E5 179 aaKnown RBP4.15□□□□□ -1.75
PTCD3-216ENST00000487043 LSM4Q9Y4Z0 139 aaKnown RBP4.15□□□□□ -1.75
PTCD3-216ENST00000487043 LY75O60449 1722 aa4.15□□□□□ -1.75
PTCD3-216ENST00000487043 COL5A3P25940 1745 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms