RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 NFKBIAP25963 317 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 CD6P30203 668 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 OXTRP30559 389 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 MAGEA4P43358 317 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 ZNF140P52738 457 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-229ENST00000486665 TMPRSS15P98073 1019 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 ARHGEF7Q14155 803 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 FGL2Q14314 439 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 PLK5Q496M5 336 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 UBAP2Q5T6F2 1119 aaKnown RBP12.76□□□□□ -0.37
HDAC6-229ENST00000486665 TSTD2Q5T7W7 516 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 TBC1D3GQ6DHY5 549 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 TBC1D3CQ6IPX1 549 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 CASC4Q6P4E1 433 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 TECPR1Q7Z6L1 1165 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 ZBED8Q8IZ13 594 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 TBC1D3Q8IZP1 549 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-229ENST00000486665 FBXO36Q8NEA4 188 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 PPHLN1Q8NEY8 458 aaKnown RBP12.76□□□□□ -0.37
HDAC6-229ENST00000486665 OR4K2Q8NGD2 314 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 OR13C4Q8NGS5 318 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 OR2T34Q8NGX1 318 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 CXorf40AQ8TE69 158 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 KLK6Q92876 244 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 STAMBPL1Q96FJ0 436 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 LOXL4Q96JB6 756 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 ZC3H10Q96K80 434 aaKnown RBP12.76□□□□□ -0.37
HDAC6-229ENST00000486665 DNAJC1Q96KC8 554 aaKnown RBP12.76□□□□□ -0.37
HDAC6-229ENST00000486665 COQ10AQ96MF6 247 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 C6orf106Q9H6K1 298 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-229ENST00000486665 PREBQ9HCU5 417 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 CHMP2BQ9UQN3 213 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 CCDC163A0A0D9SF12 145 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 MAGEB16A2A368 324 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 HEATR9A2RTY3 570 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 C2orf81A6NN90 581 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 STX7O15400 261 aaKnown RBP12.75□□□□□ -0.37
HDAC6-229ENST00000486665 SEMA4FO95754 770 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 ELFN1P0C7U0 828 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 C6P13671 934 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 ZNF30P17039 623 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 BPIP17213 487 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 PSMA3P25788 255 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 HMGCLP35914 325 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 MPLP40238 635 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 ETV3P41162 512 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 SPINT3P49223 89 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 ARSDP51689 593 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 PPP2CBP62714 309 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 PPP2CAP67775 309 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 ACOX1Q15067 660 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 ANKRD20A4Q4UJ75 823 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 Q6ZVL8 140 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 TMEM135Q86UB9 458 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 HORMAD1Q86X24 394 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 DEFB119Q8N690 84 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 OR13J1Q8NGT2 312 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 PYROXD1Q8WU10 500 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 STYXQ8WUJ0 223 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 LRRC39Q96DD0 335 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 MFSD3Q96ES6 412 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 CFAP36Q96G28 342 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 C9orf72Q96LT7 481 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 GPR174Q9BXC1 333 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 TXLNGYQ9BZA5 131 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 KDM4CQ9H3R0 1056 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 MRM3Q9HC36 420 aaKnown RBP12.75□□□□□ -0.37
HDAC6-229ENST00000486665 TREX1Q9NSU2 369 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 CD84Q9UIB8 345 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 SPEGQ15772 3267 aa12.75□□□□□ -0.37
HDAC6-229ENST00000486665 THADAQ6YHU6 1953 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 FAM237BA0A1B0GVD1 139 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 LRRC72A6NJI9 287 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 PSMD11O00231 422 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 GIPC1O14908 333 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 LZTS3O60299 673 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-229ENST00000486665 RECQL5O94762 991 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-229ENST00000486665 KCNK5O95279 499 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 PAK4O96013 591 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-229ENST00000486665 BCKDHBP21953 392 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 MAT2AP31153 395 aaKnown RBP12.74□□□□□ -0.37
HDAC6-229ENST00000486665 GPX6P59796 221 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 RPS21P63220 83 aaKnown RBP12.74□□□□□ -0.37
HDAC6-229ENST00000486665 CREB5Q02930 508 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 LAMB3Q13751 1172 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 ZNF284Q2VY69 593 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 TMEM259Q4ZIN3 620 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 USP39Q53GS9 565 aaKnown RBP12.74□□□□□ -0.37
HDAC6-229ENST00000486665 NEK5Q6P3R8 708 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 UNC5AQ6ZN44 842 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 NLRP9Q7RTR0 991 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 RELL1Q8IUW5 271 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 UNC5BQ8IZJ1 945 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 GPR26Q8NDV2 337 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 AENQ8WTP8 325 aaKnown RBP12.74□□□□□ -0.37
HDAC6-229ENST00000486665 PTCD2Q8WV60 388 aaKnown RBP12.74□□□□□ -0.37
HDAC6-229ENST00000486665 CDKN2AIPNLQ96HQ2 116 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 TBATAQ96M53 351 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 C1QTNF2Q9BXJ5 285 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 PHACTR1Q9C0D0 580 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms