RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CD1EP15812 388 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 GM2AP17900 193 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 CAPN3P20807 821 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 SOX11P35716 441 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 ACVRL1P37023 503 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 MMP12P39900 470 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 ACADSBP45954 432 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 SNRPD1P62314 119 aaKnown RBP8.22□□□□□ -1.09
XRN1-212ENST00000486211 CTBSQ01459 385 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 GNA12Q03113 381 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 ELP6Q0PNE2 266 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 BIRC2Q13490 618 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 CBWD6Q4V339 395 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 CBWD3Q5JTY5 395 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 CBWD5Q5RIA9 395 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.22□□□□□ -1.09
XRN1-212ENST00000486211 TMEM110Q86TL2 294 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 SYVN1Q86TM6 617 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 IQUBQ8NA54 791 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 ADAMTS17Q8TE56 1095 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 ITLN2Q8WWU7 325 aaPredicted RBP8.22□□□□□ -1.09
XRN1-212ENST00000486211 SEC14L1Q92503 715 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 HMCESQ96FZ2 354 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 AHCYL2Q96HN2 611 aaKnown RBP8.22□□□□□ -1.09
XRN1-212ENST00000486211 USP28Q96RU2 1077 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 ZMYND15Q9H091 742 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 SUDS3Q9H7L9 328 aaPredicted RBP8.22□□□□□ -1.09
XRN1-212ENST00000486211 AKIRIN1Q9H9L7 192 aaPredicted RBP8.22□□□□□ -1.09
XRN1-212ENST00000486211 MAGEF1Q9HAY2 307 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 GPAMQ9HCL2 828 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 PCDH12Q9NPG4 1184 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 ARHGEF38Q9NXL2 777 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 MOSPD1Q9UJG1 213 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 PADI1Q9ULC6 663 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 B3GNT3Q9Y2A9 372 aa8.22□□□□□ -1.09
XRN1-212ENST00000486211 COPG1Q9Y678 874 aaKnown RBP8.22□□□□□ -1.09
XRN1-212ENST00000486211 A0A1B0GTH6 734 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 TSPAN11A1L157 253 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 CALUO43852 315 aaPredicted RBP8.21□□□□□ -1.1
XRN1-212ENST00000486211 RECQL5O94762 991 aaPredicted RBP8.21□□□□□ -1.1
XRN1-212ENST00000486211 PROCP04070 461 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 STSP08842 583 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 CD99P14209 185 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 LPOP22079 712 aaPredicted RBP8.21□□□□□ -1.1
XRN1-212ENST00000486211 PTPN4P29074 926 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 SSTR2P30874 369 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 PSMC2P35998 433 aaKnown RBP8.21□□□□□ -1.1
XRN1-212ENST00000486211 GNPDA1P46926 289 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 SUOXP51687 545 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 SNRPNP63162 240 aaKnown RBP8.21□□□□□ -1.1
XRN1-212ENST00000486211 NME3Q13232 169 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 POLD3Q15054 466 aaPredicted RBP8.21□□□□□ -1.1
XRN1-212ENST00000486211 UGP2Q16851 508 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 ZNF630Q2M218 657 aaPredicted RBP8.21□□□□□ -1.1
XRN1-212ENST00000486211 DENND1BQ6P3S1 775 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 BNC2Q6ZN30 1099 aaPredicted RBP8.21□□□□□ -1.1
XRN1-212ENST00000486211 FJX1Q86VR8 437 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 KCNMB4Q86W47 210 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 GRAMD1CQ8IYS0 662 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 GLIS1Q8NBF1 620 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 SLC37A2Q8TED4 501 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 STK32AQ8WU08 396 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 NCSTNQ92542 709 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 TMX3Q96JJ7 454 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 MED15Q96RN5 788 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 SLC38A3Q99624 504 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 MDFIQ99750 246 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 GPR87Q9BY21 358 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 FRMD8Q9BZ67 464 aaPredicted RBP8.21□□□□□ -1.1
XRN1-212ENST00000486211 WDR26Q9H7D7 661 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 PIGVQ9NUD9 493 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 KLHL3Q9UH77 587 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 USP25Q9UHP3 1055 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 LNPEPQ9UIQ6 1025 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 MFHAS1Q9Y4C4 1052 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 PLEKHM1Q9Y4G2 1056 aa8.21□□□□□ -1.1
XRN1-212ENST00000486211 ZNF185O15231 689 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 INSIG1O15503 277 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 BUB1BO60566 1050 aaPredicted RBP8.2□□□□□ -1.1
XRN1-212ENST00000486211 SPAG6O75602 509 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 RHOBTB3O94955 611 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 TIAF1O95411 115 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 EML2O95834 649 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 GLI1P08151 1106 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 FGF5P12034 268 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 MYCLP1P12525 358 aaPredicted RBP8.2□□□□□ -1.1
XRN1-212ENST00000486211 TFE3P19532 575 aaPredicted RBP8.2□□□□□ -1.1
XRN1-212ENST00000486211 TBXAS1P24557 533 aaPredicted RBP8.2□□□□□ -1.1
XRN1-212ENST00000486211 HTR1EP28566 365 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 ADCY8P40145 1251 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 NASPP49321 788 aaPredicted RBP8.2□□□□□ -1.1
XRN1-212ENST00000486211 CXCR3P49682 368 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 RALGDSQ12967 914 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 IL11RAQ14626 422 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 VWA5B1Q5TIE3 1220 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 PNCKQ6P2M8 343 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 SHC4Q6S5L8 630 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 LEKR1Q6ZMV7 388 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 ZSWIM9Q86XI8 627 aa8.2□□□□□ -1.1
XRN1-212ENST00000486211 RASGRP3Q8IV61 690 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms