RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CA5BQ9Y2D0 317 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 SNX24Q9Y343 169 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 ARL5AQ9Y689 179 aa11.36□□□□□ -0.59
NUP50-216ENST00000486184 GON4LQ3T8J9 2241 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 C10orf142B7Z368 130 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 CACNB4O00305 520 aaPredicted RBP11.35□□□□□ -0.59
NUP50-216ENST00000486184 BUD23O43709 281 aaKnown RBP11.35□□□□□ -0.59
NUP50-216ENST00000486184 SEC31AO94979 1220 aaKnown RBP11.35□□□□□ -0.59
NUP50-216ENST00000486184 SYPP08247 313 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 THEGLP0DJG4 465 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 MGAT1P26572 445 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 HTR1BP28222 390 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 RPL21P46778 160 aaKnown RBP11.35□□□□□ -0.59
NUP50-216ENST00000486184 CSNK1EP49674 416 aaKnown RBP11.35□□□□□ -0.59
NUP50-216ENST00000486184 DCDC1P59894 354 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 TMPRSS15P98073 1019 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 DPTQ07507 201 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 PTK2BQ14289 1009 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 INPP5AQ14642 412 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 CCDC6Q16204 474 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 SKIDA1Q1XH10 827 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 CCDC38Q502W7 563 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 DNAJC21Q5F1R6 531 aaKnown RBP11.35□□□□□ -0.59
NUP50-216ENST00000486184 PCID2Q5JVF3 399 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 PNCKQ6P2M8 343 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 GCNT7Q6ZNI0 430 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 IQCHQ86VS3 1027 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 DCP2Q8IU60 420 aaKnown RBP11.35□□□□□ -0.59
NUP50-216ENST00000486184 PDIK1LQ8N165 341 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 TMEM145Q8NBT3 493 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 OR4K2Q8NGD2 314 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 RUBCNQ92622 972 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 SCAMP4Q969E2 229 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 SERPINB12Q96P63 405 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 RANBP9Q96S59 729 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 KLF6Q99612 283 aaPredicted RBP11.35□□□□□ -0.59
NUP50-216ENST00000486184 ORAI3Q9BRQ5 295 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 LRRC1Q9BTT6 524 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 ZSCAN5AQ9BUG6 496 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 RIOK2Q9BVS4 552 aaKnown RBP11.35□□□□□ -0.59
NUP50-216ENST00000486184 WDR26Q9H7D7 661 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 L2HGDHQ9H9P8 463 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 MBNL1Q9NR56 388 aaKnown RBP11.35□□□□□ -0.59
NUP50-216ENST00000486184 PHPT1Q9NRX4 125 aaPredicted RBP11.35□□□□□ -0.59
NUP50-216ENST00000486184 IL17CQ9P0M4 197 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 WHRNQ9P202 907 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 APPL1Q9UKG1 709 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 SLC6A14Q9UN76 642 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 PLXNB3Q9ULL4 1909 aa11.35□□□□□ -0.59
NUP50-216ENST00000486184 GLYATL1P3A0A0U1RQE8 302 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 A0A1B0GVT2 93 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 CCDC78A2IDD5 438 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 POM121BA6NF01 834 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 SDR42E2A6NKP2 422 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 H0Y8X5 98 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 TLR4O00206 839 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 VILLO15195 856 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 LRP3O75074 770 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 BPIP17213 487 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 GM2AP17900 193 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 KELP23276 732 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 IVDP26440 423 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 ZNF140P52738 457 aaPredicted RBP11.34□□□□□ -0.59
NUP50-216ENST00000486184 ATXN3P54252 364 aaPredicted RBP11.34□□□□□ -0.59
NUP50-216ENST00000486184 ARL4CP56559 192 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 YPEL5P62699 121 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 SLC7A5Q01650 507 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 GUCY2DQ02846 1103 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 CAV1Q03135 178 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 SPEM2Q0P670 501 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 ITGA9Q13797 1035 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 PDE1CQ14123 709 aaPredicted RBP11.34□□□□□ -0.59
NUP50-216ENST00000486184 HIBCHQ6NVY1 386 aaPredicted RBP11.34□□□□□ -0.59
NUP50-216ENST00000486184 SLC23A3Q6PIS1 610 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 IL27RAQ6UWB1 636 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 LAYNQ6UX15 382 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 FAM151BQ6UXP7 276 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 Q6ZSR6 202 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 RFLNAQ6ZTI6 216 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 ZNF534Q76KX8 674 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 ABI3BPQ7Z7G0 1075 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 CBARPQ8N350 705 aaPredicted RBP11.34□□□□□ -0.59
NUP50-216ENST00000486184 TRAM1L1Q8N609 369 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 NOA1Q8NC60 698 aaKnown RBP11.34□□□□□ -0.59
NUP50-216ENST00000486184 PLA2G15Q8NCC3 412 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 GPR26Q8NDV2 337 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 OR13H1Q8NG92 308 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 C1orf216Q8TAB5 229 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 STYXQ8WUJ0 223 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 PTCD2Q8WV60 388 aaKnown RBP11.34□□□□□ -0.59
NUP50-216ENST00000486184 EID2BQ96D98 161 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 C19orf43Q9BQ61 176 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 APOOQ9BUR5 198 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 SYBUQ9NX95 663 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 NFKBIL1Q9UBC1 381 aaPredicted RBP11.34□□□□□ -0.59
NUP50-216ENST00000486184 FKBPLQ9UIM3 349 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 TCAF1Q9Y4C2 921 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 KCTD3Q9Y597 815 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 MAD1L1Q9Y6D9 718 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 SLCO1B1Q9Y6L6 691 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms