RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 CCHCR1Q8TD31 782 aa11.84□□□□□ -0.51
APTX-227ENST00000485479 ZNF778Q96MU6 729 aa11.84□□□□□ -0.51
APTX-227ENST00000485479 PWWP2AQ96N64 755 aa11.84□□□□□ -0.51
APTX-227ENST00000485479 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.84□□□□□ -0.51
APTX-227ENST00000485479 TMEM202A6NGA9 273 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 CDX4O14627 284 aaPredicted RBP11.83□□□□□ -0.52
APTX-227ENST00000485479 VILLO15195 856 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 RAD51CO43502 376 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 BANF1O75531 89 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 PRSS56P0CW18 603 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 NFKBIAP25963 317 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 ADCY8P40145 1251 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 GPR1P46091 355 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 POLD2P49005 469 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 ATXN3P54252 364 aaPredicted RBP11.83□□□□□ -0.52
APTX-227ENST00000485479 NXPH1P58417 271 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 PFN3P60673 137 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 LMNB2Q03252 620 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 KCNJ11Q14654 390 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 TEAD4Q15561 434 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 KYAT3Q6YP21 454 aaKnown RBP11.83□□□□□ -0.52
APTX-227ENST00000485479 GATAD2AQ86YP4 633 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 MFSD2AQ8NA29 543 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 CEP76Q8TAP6 659 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 GRK7Q8WTQ7 553 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 CCDC97Q96F63 343 aaPredicted RBP11.83□□□□□ -0.52
APTX-227ENST00000485479 PDXPQ96GD0 296 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 DNAJC1Q96KC8 554 aaKnown RBP11.83□□□□□ -0.52
APTX-227ENST00000485479 SPATA16Q9BXB7 569 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 C1QTNF7Q9BXJ2 289 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 SLC2A6Q9UGQ3 507 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 PCYOX1Q9UHG3 505 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 FKBPLQ9UIM3 349 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 MOSPD1Q9UJG1 213 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 MRFAP1Q9Y605 127 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 ASCC3Q8N3C0 2202 aaKnown RBP11.83□□□□□ -0.52
APTX-227ENST00000485479 CABIN1Q9Y6J0 2220 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 C4orf47A7E2U8 309 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 PSMD11O00231 422 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 HOXD12P35452 270 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 HMGCLP35914 325 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 CTSKP43235 329 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 FZD2Q14332 565 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 HENMT1Q5T8I9 393 aaKnown RBP11.83□□□□□ -0.52
APTX-227ENST00000485479 ESRP1Q6NXG1 681 aaKnown RBP11.83□□□□□ -0.52
APTX-227ENST00000485479 CES3Q6UWW8 571 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 MARK2Q7KZI7 788 aaKnown RBP11.83□□□□□ -0.52
APTX-227ENST00000485479 MPP5Q8N3R9 675 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 LRRN4CLQ8ND94 238 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 KIF18AQ8NI77 898 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 TSACCQ96A04 125 aaPredicted RBP11.83□□□□□ -0.52
APTX-227ENST00000485479 APOOQ9BUR5 198 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 DPH5Q9H2P9 285 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 FAM83DQ9H4H8 585 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 WDR26Q9H7D7 661 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 DNAJC28Q9NX36 388 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 PKD2L2Q9NZM6 624 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 TMEM98Q9Y2Y6 226 aa11.83□□□□□ -0.52
APTX-227ENST00000485479 PCYT1BQ9Y5K3 369 aaPredicted RBP11.83□□□□□ -0.52
APTX-227ENST00000485479 OR51F1A6NGY5 319 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 PRR5-ARHGAP8B1AHC4 643 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 CCDC188H7C350 402 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 LDB2O43679 373 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 UGT1A9O60656 530 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 SUN1O94901 812 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 CELA2BP08218 269 aaPredicted RBP11.82□□□□□ -0.52
APTX-227ENST00000485479 UGT1A6P19224 532 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 UGT1A1P22309 533 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 UGT1A4P22310 534 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 MGAT1P26572 445 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 UGT1A3P35503 534 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 UGT1A5P35504 534 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 THOP1P52888 689 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 CDK3Q00526 305 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 SLC7A5Q01650 507 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 CDH17Q12864 832 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 BNIP3Q12983 259 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 PTK6Q13882 451 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 TRADDQ15628 312 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 HP1BP3Q5SSJ5 553 aaPredicted RBP11.82□□□□□ -0.52
APTX-227ENST00000485479 ENPP7Q6UWV6 458 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 DENND6BQ8NEG7 585 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 FAM96AQ9H5X1 160 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 UGT1A7Q9HAW7 530 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 UGT1A10Q9HAW8 530 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 UGT1A8Q9HAW9 530 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 ARNT2Q9HBZ2 717 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 FGF22Q9HCT0 170 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 IL26Q9NPH9 171 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 CASS4Q9NQ75 786 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 GDF3Q9NR23 364 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 IL17CQ9P0M4 197 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 RNF14Q9UBS8 474 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 PRKAB1Q9Y478 270 aa11.82□□□□□ -0.52
APTX-227ENST00000485479 OAS3Q9Y6K5 1087 aaKnown RBP11.82□□□□□ -0.52
APTX-227ENST00000485479 GAPDHSO14556 408 aaPredicted RBP11.81□□□□□ -0.52
APTX-227ENST00000485479 STX7O15400 261 aaKnown RBP11.81□□□□□ -0.52
APTX-227ENST00000485479 ZNF189O75820 626 aaPredicted RBP11.81□□□□□ -0.52
APTX-227ENST00000485479 FUCA1P04066 466 aa11.81□□□□□ -0.52
APTX-227ENST00000485479 F7P08709 466 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms