RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 DNPEPQ9ULA0 475 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 LOXL2Q9Y4K0 774 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 RNF215Q9Y6U7 377 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 NPIPB15A6NHN6 443 aaPredicted RBP13.22□□□□□ -0.29
UBA3-210ENST00000485424 PGLSO95336 258 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 LIPCP11150 499 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 GM2AP17900 193 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 MAPK10P53779 464 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 SLC25A11Q02978 314 aaKnown RBP13.22□□□□□ -0.29
UBA3-210ENST00000485424 HLTFQ14527 1009 aaKnown RBP eCLIP13.22□□□□□ -0.29
UBA3-210ENST00000485424 AMZ1Q400G9 498 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 TMEM164Q5U3C3 297 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 TXNRD3NBQ6F5E7 133 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 ALKBH5Q6P6C2 394 aaKnown RBP13.22□□□□□ -0.29
UBA3-210ENST00000485424 OGFOD3Q6PK18 319 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 SLC30A9Q6PML9 568 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 HSD11B1LQ7Z5J1 315 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 SPRED1Q7Z699 444 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 SFTPA2Q8IWL1 248 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 EXD3Q8N9H8 876 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 SPOCK2Q92563 424 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 SCRN2Q96FV2 425 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 ZNF830Q96NB3 372 aaPredicted RBP13.22□□□□□ -0.29
UBA3-210ENST00000485424 ANP32EQ9BTT0 268 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 TEX101Q9BY14 249 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 CDH19Q9H159 772 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 DEF6Q9H4E7 631 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 CLMPQ9H6B4 373 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 CTTNBP2NLQ9P2B4 639 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 CAPN11Q9UMQ6 739 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 SUFUQ9UMX1 484 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 LRRK2Q5S007 2527 aa13.22□□□□□ -0.29
UBA3-210ENST00000485424 UTP20O75691 2785 aaKnown RBP13.22□□□□□ -0.29
UBA3-210ENST00000485424 A0A087X0T9 212 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 MFSD11O43934 449 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 PEX11BO96011 259 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 CYP1A2P05177 515 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 PYGLP06737 847 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 FAM228BP0C875 321 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 ZNF30P17039 623 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 ITIH1P19827 911 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 LHCGRP22888 699 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 CES1P23141 567 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 ALDH4A1P30038 563 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 GARSP41250 739 aaKnown RBP13.21□□□□□ -0.29
UBA3-210ENST00000485424 MAZP56270 477 aaKnown RBP13.21□□□□□ -0.29
UBA3-210ENST00000485424 IFI16Q16666 785 aaKnown RBP13.21□□□□□ -0.29
UBA3-210ENST00000485424 LINC00303Q3SY05 128 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 HGSNATQ68CP4 663 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 Q6ZVL8 140 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 PRICKLE2Q7Z3G6 844 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 PELI3Q8N2H9 469 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 GPBAR1Q8TDU6 330 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 CTNNBL1Q8WYA6 563 aaPredicted RBP13.21□□□□□ -0.29
UBA3-210ENST00000485424 AP2M1Q96CW1 435 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 SGF29Q96ES7 293 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 FUCA2Q9BTY2 467 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 TRNAU1APQ9NX07 287 aaKnown RBP13.21□□□□□ -0.29
UBA3-210ENST00000485424 TAAR2Q9P1P5 351 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 CD84Q9UIB8 345 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 LCMT1Q9UIC8 334 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 PCDHB11Q9Y5F2 797 aa13.21□□□□□ -0.29
UBA3-210ENST00000485424 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.21□□□□□ -0.296e-7■■■□□ 14.9
UBA3-210ENST00000485424 SPENQ96T58 3664 aaKnown RBP13.21□□□□□ -0.3
UBA3-210ENST00000485424 RELNP78509 3460 aa13.21□□□□□ -0.3
UBA3-210ENST00000485424 CYSRT1A8MQ03 144 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 NVLO15381 856 aaKnown RBP13.2□□□□□ -0.3
UBA3-210ENST00000485424 ASMTLO95671 621 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 CPNE6O95741 557 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 CEACAM5P06731 702 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 IVLP07476 585 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 KRT7P08729 469 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 H2AFZP0C0S5 128 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 MX2P20592 715 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 AK4P27144 223 aaPredicted RBP13.2□□□□□ -0.3
UBA3-210ENST00000485424 TEAD1P28347 426 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 ETV5P41161 510 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 ACTR1BP42025 376 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 ACTR1AP61163 376 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 ZFP36L1Q07352 338 aaKnown RBP13.2□□□□□ -0.3
UBA3-210ENST00000485424 DPTQ07507 201 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 NFATC3Q12968 1075 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 PDK2Q15119 407 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 ODF2Q5BJF6 829 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 LRRC66Q68CR7 880 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 NCBP2-AS2Q69YL0 99 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 USP53Q70EK8 1073 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 H2AFVQ71UI9 128 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 TMPRSS9Q7Z410 1059 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 TSPAN33Q86UF1 283 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 TEX26Q8N6G2 289 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 ZSCAN1Q8NBB4 408 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 CCNYQ8ND76 341 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 NSMCE3Q96MG7 304 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 OR2M4Q96R27 311 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 ARHGAP9Q9BRR9 750 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 FRMD8Q9BZ67 464 aaPredicted RBP13.2□□□□□ -0.3
UBA3-210ENST00000485424 SPATS2LQ9NUQ6 558 aaKnown RBP13.2□□□□□ -0.3
UBA3-210ENST00000485424 RBM22Q9NW64 420 aaKnown RBP eCLIP13.2□□□□□ -0.32e-6■■■■□ 25.8
UBA3-210ENST00000485424 IFNKQ9P0W0 207 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms