RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 FZD6O60353 706 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 CD48P09326 243 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 WT1P19544 449 aaPredicted RBP19.17■□□□□ 0.66
COL27A1-205ENST00000485397 DPTQ07507 201 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 ITKQ08881 620 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 BIRC2Q13490 618 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 KRT81Q14533 505 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 IHHQ14623 411 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 NKAIN2Q5VXU1 208 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 LRRC66Q68CR7 880 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 TRIM74Q86UV6 250 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 DTX1Q86Y01 620 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.17■□□□□ 0.66
COL27A1-205ENST00000485397 NIPA2Q8N8Q9 360 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 EXTL1Q92935 676 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 SCAMP4Q969E2 229 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 AP2M1Q96CW1 435 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 NUP85Q9BW27 656 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 SEPT10Q9P0V9 454 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 IP6K2Q9UHH9 426 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 ANAPC7Q9UJX3 599 aa19.17■□□□□ 0.66
COL27A1-205ENST00000485397 IGHV5-10-1A0A0J9YXX1 117 aa19.16■□□□□ 0.66
COL27A1-205ENST00000485397 MFSD11O43934 449 aa19.16■□□□□ 0.66
COL27A1-205ENST00000485397 SERPINC1P01008 464 aa19.16■□□□□ 0.66
COL27A1-205ENST00000485397 ACTR1BP42025 376 aa19.16■□□□□ 0.66
COL27A1-205ENST00000485397 ACTR1AP61163 376 aa19.16■□□□□ 0.66
COL27A1-205ENST00000485397 PTSQ03393 145 aa19.16■□□□□ 0.66
COL27A1-205ENST00000485397 IQCB1Q15051 598 aa19.16■□□□□ 0.66
COL27A1-205ENST00000485397 FIGNQ5HY92 759 aa19.16■□□□□ 0.66
COL27A1-205ENST00000485397 MARK2Q7KZI7 788 aaKnown RBP19.16■□□□□ 0.66
COL27A1-205ENST00000485397 JPH3Q8WXH2 748 aaPredicted RBP19.16■□□□□ 0.66
COL27A1-205ENST00000485397 SCARF2Q96GP6 870 aaPredicted RBP19.16■□□□□ 0.66
COL27A1-205ENST00000485397 CCDC74BQ96LY2 380 aa19.16■□□□□ 0.66
COL27A1-205ENST00000485397 AGAP2Q99490 1192 aa19.16■□□□□ 0.66
COL27A1-205ENST00000485397 AKAP7Q9P0M2 348 aaPredicted RBP19.16■□□□□ 0.66
COL27A1-205ENST00000485397 PCDHB11Q9Y5F2 797 aa19.16■□□□□ 0.66
COL27A1-205ENST00000485397 FLNBO75369 2602 aaKnown RBP19.15■□□□□ 0.66
COL27A1-205ENST00000485397 SLC28A2O43868 658 aa19.15■□□□□ 0.66
COL27A1-205ENST00000485397 MAP3K6O95382 1288 aa19.15■□□□□ 0.66
COL27A1-205ENST00000485397 CYP1A2P05177 515 aa19.15■□□□□ 0.66
COL27A1-205ENST00000485397 MPSTP25325 297 aa19.15■□□□□ 0.66
COL27A1-205ENST00000485397 SSR1P43307 286 aaKnown RBP19.15■□□□□ 0.66
COL27A1-205ENST00000485397 GPR3P46089 330 aa19.15■□□□□ 0.66
COL27A1-205ENST00000485397 DSC2Q02487 901 aa19.15■□□□□ 0.66
COL27A1-205ENST00000485397 CLPPQ16740 277 aaPredicted RBP19.15■□□□□ 0.66
COL27A1-205ENST00000485397 ATP13A4Q4VNC1 1196 aa19.15■□□□□ 0.66
COL27A1-205ENST00000485397 ADAMTSL4Q6UY14 1074 aa19.15■□□□□ 0.66
COL27A1-205ENST00000485397 CPNE8Q86YQ8 564 aa19.15■□□□□ 0.66
COL27A1-205ENST00000485397 NDUFAF2Q8N183 169 aa19.15■□□□□ 0.66
COL27A1-205ENST00000485397 FAM71BQ8TC56 605 aa19.15■□□□□ 0.66
COL27A1-205ENST00000485397 PMEPA1Q969W9 287 aa19.15■□□□□ 0.66
COL27A1-205ENST00000485397 OR2M4Q96R27 311 aa19.15■□□□□ 0.66
COL27A1-205ENST00000485397 PCDHGA4Q9Y5G9 962 aa19.15■□□□□ 0.66
COL27A1-205ENST00000485397 TRBV23OR9-2A0A075B6M9 112 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 IGHV1OR21-1A0A087WYE8 117 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 A0A087X0T9 212 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 A0A0J9YYE9 177 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 HGSO14964 777 aaPredicted RBP19.14■□□□□ 0.65
COL27A1-205ENST00000485397 ZW10O43264 779 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 TRBC1P01850 177 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 FAM228BP0C875 321 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 FGF3P11487 239 aaPredicted RBP19.14■□□□□ 0.65
COL27A1-205ENST00000485397 CD82P27701 267 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 GARSP41250 739 aaKnown RBP19.14■□□□□ 0.65
COL27A1-205ENST00000485397 ARSDP51689 593 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 ARSEP51690 589 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 LIMK2P53671 638 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 CYP4F2P78329 520 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 GALNT2Q10471 571 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 NFATC3Q12968 1075 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 PYCR3Q53H96 274 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 CCDC122Q5T0U0 273 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 TMEM164Q5U3C3 297 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 NCBP2-AS2Q69YL0 99 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 CAVIN1Q6NZI2 390 aaKnown RBP19.14■□□□□ 0.65
COL27A1-205ENST00000485397 LRRC49Q8IUZ0 686 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 LRRN4Q8WUT4 740 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 MAML1Q92585 1016 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 ARHGAP9Q9BRR9 750 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 POLR1EQ9GZS1 481 aaKnown RBP19.14■□□□□ 0.65
COL27A1-205ENST00000485397 CDH19Q9H159 772 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 TMEM9Q9P0T7 183 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 RCOR3Q9P2K3 495 aaPredicted RBP19.14■□□□□ 0.65
COL27A1-205ENST00000485397 CHKBQ9Y259 395 aa19.14■□□□□ 0.65
COL27A1-205ENST00000485397 BZW2Q9Y6E2 419 aaKnown RBP19.14■□□□□ 0.65
COL27A1-205ENST00000485397 PIEZO2Q9H5I5 2752 aa19.13■□□□□ 0.65
COL27A1-205ENST00000485397 MYO1FO00160 1098 aa19.13■□□□□ 0.65
COL27A1-205ENST00000485397 INPP4BO15327 924 aa19.13■□□□□ 0.65
COL27A1-205ENST00000485397 PRLP01236 227 aa19.13■□□□□ 0.65
COL27A1-205ENST00000485397 CSF2RBP32927 897 aa19.13■□□□□ 0.65
COL27A1-205ENST00000485397 GJC1P36383 396 aa19.13■□□□□ 0.65
COL27A1-205ENST00000485397 STC1P52823 247 aa19.13■□□□□ 0.65
COL27A1-205ENST00000485397 EPHB1P54762 984 aa19.13■□□□□ 0.65
COL27A1-205ENST00000485397 DPYSL3Q14195 570 aa19.13■□□□□ 0.65
COL27A1-205ENST00000485397 NLRP8Q86W28 1048 aa19.13■□□□□ 0.65
COL27A1-205ENST00000485397 ZNF761Q86XN6 746 aaPredicted RBP19.13■□□□□ 0.65
COL27A1-205ENST00000485397 CPLX3Q8WVH0 158 aa19.13■□□□□ 0.65
COL27A1-205ENST00000485397 HTR3CQ8WXA8 447 aa19.13■□□□□ 0.65
COL27A1-205ENST00000485397 SYN2Q92777 582 aaPredicted RBP19.13■□□□□ 0.65
COL27A1-205ENST00000485397 FUCA2Q9BTY2 467 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms