RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 IL22RA1Q8N6P7 574 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 PAF1Q8N7H5 531 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 BMPERQ8N8U9 685 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 ART4Q93070 314 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 SLC45A3Q96JT2 553 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 PEBP4Q96S96 227 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 MGME1Q9BQP7 344 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 SEPT11Q9NVA2 429 aaKnown RBP12.98□□□□□ -0.33
HDAC6-227ENST00000485102 FANCLQ9NW38 375 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 CWC15Q9P013 229 aaKnown RBP12.98□□□□□ -0.33
HDAC6-227ENST00000485102 PILRAQ9UKJ1 303 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 MYO6Q9UM54 1294 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 PCDHGC4Q9Y5F7 938 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 USP9YO00507 2555 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-227ENST00000485102 SPTBN1Q01082 2364 aaKnown RBP12.97□□□□□ -0.33
HDAC6-227ENST00000485102 CLEC18AA5D8T8 446 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 ZNF891A8MT65 544 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-227ENST00000485102 PYGLP06737 847 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 LIFP15018 202 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 LHCGRP22888 699 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 MIPP30301 263 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 ETV3P41162 512 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 GNPDA1P46926 289 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 POLE2P56282 527 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 KCNAB2Q13303 367 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 LRP8Q14114 963 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 CRTC2Q53ET0 693 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-227ENST00000485102 DCAF12Q5T6F0 453 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 SLC30A9Q6PML9 568 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 CLEC18BQ6UXF7 455 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 ADAMTSL4Q6UY14 1074 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 Q6ZVL8 140 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 ARHGAP22Q7Z5H3 698 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 HSD11B1LQ7Z5J1 315 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 CACNA2D3Q8IZS8 1091 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 CLEC18CQ8NCF0 446 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 PATE1Q8WXA2 126 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 PMEPA1Q969W9 287 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 ZPBPQ9BS86 351 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 EFHD1Q9BUP0 239 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 NOD2Q9HC29 1040 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 SLC39A1Q9NY26 324 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 PCSK1NQ9UHG2 260 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 ANAPC2Q9UJX6 822 aa12.97□□□□□ -0.33
HDAC6-227ENST00000485102 SPTAN1Q13813 2472 aaKnown RBP12.96□□□□□ -0.33
HDAC6-227ENST00000485102 AGRPO00253 132 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 PRPSAP2O60256 369 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 MAFKO60675 156 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 LRCH4O75427 683 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 PGLSO95336 258 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 SOD1P00441 154 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 CPP00450 1065 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 GZMAP12544 262 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 TNFAIP3P21580 790 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 MAP4P27816 1152 aaKnown RBP12.96□□□□□ -0.33
HDAC6-227ENST00000485102 CSF2RBP32927 897 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 PCK1P35558 622 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 CASRP41180 1078 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 ACTR1BP42025 376 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 CCR10P46092 362 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 ACTR1AP61163 376 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 UBXN1Q04323 297 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 TRAF2Q12933 501 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 BIRC2Q13490 618 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 ZNF235Q14590 738 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 DPYSL2Q16555 572 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 PYCR3Q53H96 274 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 PPP6R3Q5H9R7 873 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-227ENST00000485102 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-227ENST00000485102 RAET1GQ6H3X3 334 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 WDR74Q6RFH5 385 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-227ENST00000485102 ZNF765Q7L2R6 523 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 APTXQ7Z2E3 356 aaKnown RBP12.96□□□□□ -0.33
HDAC6-227ENST00000485102 LRRC49Q8IUZ0 686 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 TP53INP2Q8IXH6 220 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 BBS5Q8N3I7 341 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 PGBD5Q8N414 524 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 SFRP1Q8N474 314 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 PTCD2Q8WV60 388 aaKnown RBP12.96□□□□□ -0.33
HDAC6-227ENST00000485102 PIH1D2Q8WWB5 315 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 JPH3Q8WXH2 748 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-227ENST00000485102 PCMTD1Q96MG8 357 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-227ENST00000485102 OR2M4Q96R27 311 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 ZWILCHQ9H900 591 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 FBXO8Q9NRD0 319 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 OCIAD1Q9NX40 245 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 KCNK4Q9NYG8 393 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 TAS2R14Q9NYV8 317 aa12.96□□□□□ -0.33
HDAC6-227ENST00000485102 NPIPB15A6NHN6 443 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-227ENST00000485102 FZD6O60353 706 aa12.95□□□□□ -0.34
HDAC6-227ENST00000485102 RAD1O60671 282 aa12.95□□□□□ -0.34
HDAC6-227ENST00000485102 NTRK1P04629 796 aa12.95□□□□□ -0.34
HDAC6-227ENST00000485102 ZNF30P17039 623 aa12.95□□□□□ -0.34
HDAC6-227ENST00000485102 POLD2P49005 469 aa12.95□□□□□ -0.34
HDAC6-227ENST00000485102 MC2RQ01718 297 aa12.95□□□□□ -0.34
HDAC6-227ENST00000485102 UBAP2LQ14157 1087 aaKnown RBP12.95□□□□□ -0.34
HDAC6-227ENST00000485102 BOLA3Q53S33 107 aa12.95□□□□□ -0.34
HDAC6-227ENST00000485102 NKAIN2Q5VXU1 208 aa12.95□□□□□ -0.34
HDAC6-227ENST00000485102 USP45Q70EL2 814 aa12.95□□□□□ -0.34
HDAC6-227ENST00000485102 POLNQ7Z5Q5 900 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms