RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.42□□□□□ -0.58
SCFD1-206ENST00000484733 PDHA1P08559 390 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 STC1P52823 247 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 UBASH3AP57075 661 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 CTBSQ01459 385 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 PTSQ03393 145 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 MMRN1Q13201 1228 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 DPYSL3Q14195 570 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 FAF2Q96CS3 445 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 COX14Q96I36 57 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 LYSMD1Q96S90 227 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 SEMA6CQ9H3T2 930 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 AKAP7Q9P0M2 348 aaPredicted RBP11.42□□□□□ -0.58
SCFD1-206ENST00000484733 SEPT10Q9P0V9 454 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 LOC400499M0QZD8 3231 aa11.42□□□□□ -0.58
SCFD1-206ENST00000484733 ARHGEF17Q96PE2 2063 aaPredicted RBP11.41□□□□□ -0.58
SCFD1-206ENST00000484733 MFSD11O43934 449 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 ECEL1O95672 775 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 CD48P09326 243 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 CTPS1P17812 591 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 CD1CP29017 333 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 ETV5P41161 510 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 OR1D5P58170 312 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 PTPRRQ15256 657 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 ANKRD20A8PQ5CZ79 823 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 CCDC122Q5T0U0 273 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 LRRC66Q68CR7 880 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 DTX1Q86Y01 620 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 NAGSQ8N159 534 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 ARRDC2Q8TBH0 407 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 PTCD2Q8WV60 388 aaKnown RBP11.41□□□□□ -0.58
SCFD1-206ENST00000484733 USP7Q93009 1102 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 AP2M1Q96CW1 435 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 UVRAGQ9P2Y5 699 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 LUC7L2Q9Y383 392 aaKnown RBP11.41□□□□□ -0.58
SCFD1-206ENST00000484733 ST14Q9Y5Y6 855 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 PRAMEF33A0A0G2JMD5 474 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 C9orf172C9J069 976 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 PRAMEF10O60809 474 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 PROSCO94903 275 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 PRLP01236 227 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 ITIH1P19827 911 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 CA4P22748 312 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 AK4P27144 223 aaPredicted RBP11.41□□□□□ -0.58
SCFD1-206ENST00000484733 HNRNPH3P31942 346 aaKnown RBP11.41□□□□□ -0.58
SCFD1-206ENST00000484733 POLD2P49005 469 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 IHHQ14623 411 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 MAP9Q49MG5 647 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 PYCR3Q53H96 274 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 KIAA1614Q5VZ46 1190 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 ZNF574Q6ZN55 896 aaPredicted RBP11.41□□□□□ -0.58
SCFD1-206ENST00000484733 MAP7D3Q8IWC1 876 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 ZNF564Q8TBZ8 553 aaPredicted RBP11.41□□□□□ -0.58
SCFD1-206ENST00000484733 SGF29Q96ES7 293 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 OR2M4Q96R27 311 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 TDRD1Q9BXT4 1180 aaKnown RBP11.41□□□□□ -0.58
SCFD1-206ENST00000484733 SEMA4CQ9C0C4 833 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 CDH19Q9H159 772 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 RBM22Q9NW64 420 aaKnown RBP eCLIP11.41□□□□□ -0.582e-7■■■■□ 25.7
SCFD1-206ENST00000484733 PCDHGA3Q9Y5H0 932 aa11.41□□□□□ -0.58
SCFD1-206ENST00000484733 UNC13CQ8NB66 2214 aa11.4□□□□□ -0.58
SCFD1-206ENST00000484733 B8ZZF3 427 aa11.4□□□□□ -0.58
SCFD1-206ENST00000484733 ITGB2P05107 769 aa11.4□□□□□ -0.58
SCFD1-206ENST00000484733 MX2P20592 715 aa11.4□□□□□ -0.58
SCFD1-206ENST00000484733 MAN1A1P33908 653 aa11.4□□□□□ -0.58
SCFD1-206ENST00000484733 LIMK2P53671 638 aa11.4□□□□□ -0.58
SCFD1-206ENST00000484733 ITKQ08881 620 aa11.4□□□□□ -0.58
SCFD1-206ENST00000484733 LRP8Q14114 963 aa11.4□□□□□ -0.58
SCFD1-206ENST00000484733 LY6DQ14210 128 aa11.4□□□□□ -0.58
SCFD1-206ENST00000484733 C16orf72Q14CZ0 275 aa11.4□□□□□ -0.58
SCFD1-206ENST00000484733 PHF19Q5T6S3 580 aa11.4□□□□□ -0.58
SCFD1-206ENST00000484733 RFLNAQ6ZTI6 216 aa11.4□□□□□ -0.58
SCFD1-206ENST00000484733 OR4D9Q8NGE8 314 aa11.4□□□□□ -0.58
SCFD1-206ENST00000484733 VPS18Q9P253 973 aa11.4□□□□□ -0.58
SCFD1-206ENST00000484733 IGHV5-10-1A0A0J9YXX1 117 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 RGSL1A5PLK6 1076 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 ZNF487B1APH4 448 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 J3QKU1 62 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 PPM1DO15297 605 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 KRT7P08729 469 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 EPHB1P54762 984 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 DSC2Q02487 901 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 NFKBIBQ15653 356 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 ATP13A4Q4VNC1 1196 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 TMEM164Q5U3C3 297 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 SLC30A9Q6PML9 568 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 USP53Q70EK8 1073 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 LUZP1Q86V48 1076 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 KCTD6Q8NC69 237 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 EXD1Q8NHP7 514 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 CPLX3Q8WVH0 158 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 HDAC11Q96DB2 347 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 TAAR9Q96RI9 348 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 FOXJ2Q9P0K8 574 aa11.4□□□□□ -0.59
SCFD1-206ENST00000484733 IGHV1OR21-1A0A087WYE8 117 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 GOLGA6CA6NDK9 693 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 GOLGA6BA6NDN3 693 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 GYPCP04921 128 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 H2AFZP0C0S5 128 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 GOLGA6DP0CG33 693 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms