RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TAF4O00268 1085 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 INPP4BO15327 924 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 OPA1O60313 960 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 FTCDO95954 541 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 MT-CO3P00414 261 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 FUCA1P04066 466 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 CEACAM5P06731 702 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 CDK4P11802 303 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 CTNNA2P26232 953 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 CD68P34810 354 aaPredicted RBP12.24□□□□□ -0.45
MSH5-216ENST00000484309 GNPDA1P46926 289 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 ATP5OP48047 213 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 RPL26P61254 145 aaKnown RBP12.24□□□□□ -0.45
MSH5-216ENST00000484309 E2F1Q01094 437 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 CYP4F3Q08477 520 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 NOMO1Q15155 1222 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 PPP2R5EQ16537 467 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 BZW1Q7L1Q6 419 aaKnown RBP12.24□□□□□ -0.45
MSH5-216ENST00000484309 PKD1L2Q7Z442 2459 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 TAF8Q7Z7C8 310 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 LRRC57Q8N9N7 239 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 ALG3Q92685 438 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 GLMNQ92990 594 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 TEKT5Q96M29 485 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 QKIQ96PU8 341 aaKnown RBP eCLIP12.24□□□□□ -0.45
MSH5-216ENST00000484309 TRIB3Q96RU7 358 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 TEX101Q9BY14 249 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 ADGRE3Q9BY15 652 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 FRMD8Q9BZ67 464 aaPredicted RBP12.24□□□□□ -0.45
MSH5-216ENST00000484309 ABCG4Q9H172 646 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 ZNF106Q9H2Y7 1883 aaKnown RBP12.24□□□□□ -0.45
MSH5-216ENST00000484309 USP29Q9HBJ7 922 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 KCTD5Q9NXV2 234 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 RPL26L1Q9UNX3 145 aaKnown RBP12.24□□□□□ -0.45
MSH5-216ENST00000484309 SHOC2Q9UQ13 582 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 CLCA2Q9UQC9 943 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 TMEM98Q9Y2Y6 226 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 PCDHB1Q9Y5F3 818 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 DGKBQ9Y6T7 804 aa12.24□□□□□ -0.45
MSH5-216ENST00000484309 WDFY3Q8IZQ1 3526 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 CCDC66A2RUB6 948 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 EME2A4GXA9 379 aaPredicted RBP12.23□□□□□ -0.45
MSH5-216ENST00000484309 SRRM3A6NNA2 597 aaPredicted RBP12.23□□□□□ -0.45
MSH5-216ENST00000484309 B4DGG1 531 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 APOC4-APOC2K7ER74 178 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 PDE2AO00408 941 aaPredicted RBP12.23□□□□□ -0.45
MSH5-216ENST00000484309 TNFRSF10CO14798 259 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 APOC2P02655 101 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 CAPNS1P04632 268 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 HOXC4P09017 264 aaPredicted RBP12.23□□□□□ -0.45
MSH5-216ENST00000484309 PYGMP11217 842 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 RBL1P28749 1068 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 RWDD2BP57060 319 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 OTUD4Q01804 1114 aaKnown RBP12.23□□□□□ -0.45
MSH5-216ENST00000484309 CDK18Q07002 472 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 DPTQ07507 201 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 KIF5AQ12840 1032 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 ALS2CLQ60I27 953 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 MARK2Q7KZI7 788 aaKnown RBP12.23□□□□□ -0.45
MSH5-216ENST00000484309 PEX26Q7Z412 305 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 ZNF567Q8N184 647 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 PDCD7Q8N8D1 485 aaKnown RBP12.23□□□□□ -0.45
MSH5-216ENST00000484309 ARL10Q8N8L6 244 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 FAM46DQ8NEK8 389 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 ACTL9Q8TC94 416 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 HTR3CQ8WXA8 447 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 SCG3Q8WXD2 468 aaKnown RBP12.23□□□□□ -0.45
MSH5-216ENST00000484309 LYSMD1Q96S90 227 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 OSBPL8Q9BZF1 889 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 PKD2L2Q9NZM6 624 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 AMFRQ9UKV5 643 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 DNPEPQ9ULA0 475 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 PADI4Q9UM07 663 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 SUFUQ9UMX1 484 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 ZNF711Q9Y462 761 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 PLEKHM1Q9Y4G2 1056 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 CAPN6Q9Y6Q1 641 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 ADAMTS20P59510 1910 aa12.23□□□□□ -0.45
MSH5-216ENST00000484309 URB1O60287 2271 aaKnown RBP12.22□□□□□ -0.45
MSH5-216ENST00000484309 FADS2P1A8MWK0 482 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 CSO75390 466 aaKnown RBP12.22□□□□□ -0.45
MSH5-216ENST00000484309 ASMTLO95671 621 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 GP1BAP07359 652 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 AK4P27144 223 aaPredicted RBP12.22□□□□□ -0.45
MSH5-216ENST00000484309 SPINT3P49223 89 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 RPIAP49247 311 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 COPS2P61201 443 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 ADAMTSL4Q6UY14 1074 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 ZNF765Q7L2R6 523 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 PID1Q7Z2X4 250 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 PROSER1Q86XN7 944 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 SLC25A41Q8N5S1 370 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 DCBLD1Q8N8Z6 715 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 CCHCR1Q8TD31 782 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 CCDC74AQ96AQ1 378 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 TADA1Q96BN2 335 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 EID2BQ96D98 161 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 OXNAD1Q96HP4 312 aaPredicted RBP12.22□□□□□ -0.45
MSH5-216ENST00000484309 CALR3Q96L12 384 aaKnown RBP12.22□□□□□ -0.45
MSH5-216ENST00000484309 WDR24Q96S15 920 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms