RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 INHBAP08476 426 aa4.09□□□□□ -1.75
SCAF11-207ENST00000484275 DDX5P17844 614 aaKnown RBP4.09□□□□□ -1.75
SCAF11-207ENST00000484275 GRK6P43250 576 aa4.09□□□□□ -1.75
SCAF11-207ENST00000484275 PAPOLAP51003 745 aaKnown RBP4.09□□□□□ -1.75
SCAF11-207ENST00000484275 GNB1P62873 340 aa4.09□□□□□ -1.75
SCAF11-207ENST00000484275 RPL24P83731 157 aaKnown RBP4.09□□□□□ -1.75
SCAF11-207ENST00000484275 SLC12A1Q13621 1099 aa4.09□□□□□ -1.75
SCAF11-207ENST00000484275 PDCD2Q16342 344 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-207ENST00000484275 ZNF766Q5HY98 468 aa4.09□□□□□ -1.75
SCAF11-207ENST00000484275 METTL2BQ6P1Q9 378 aaKnown RBP4.09□□□□□ -1.75
SCAF11-207ENST00000484275 FAM171BQ6P995 826 aa4.09□□□□□ -1.75
SCAF11-207ENST00000484275 CPLX2Q6PUV4 134 aaKnown RBP4.09□□□□□ -1.75
SCAF11-207ENST00000484275 QSOX2Q6ZRP7 698 aa4.09□□□□□ -1.75
SCAF11-207ENST00000484275 SAMD3Q8N6K7 520 aa4.09□□□□□ -1.75
SCAF11-207ENST00000484275 PCDH20Q8N6Y1 951 aaKnown RBP4.09□□□□□ -1.75
SCAF11-207ENST00000484275 TNIP2Q8NFZ5 429 aa4.09□□□□□ -1.75
SCAF11-207ENST00000484275 TRIM58Q8NG06 486 aa4.09□□□□□ -1.75
SCAF11-207ENST00000484275 PIGTQ969N2 578 aa4.09□□□□□ -1.75
SCAF11-207ENST00000484275 METTL2AQ96IZ6 378 aaKnown RBP4.09□□□□□ -1.75
SCAF11-207ENST00000484275 ZNF354BQ96LW1 612 aa4.09□□□□□ -1.75
SCAF11-207ENST00000484275 SH3GL2Q99962 352 aa4.09□□□□□ -1.75
SCAF11-207ENST00000484275 PLEKHA4Q9H4M7 779 aa4.09□□□□□ -1.75
SCAF11-207ENST00000484275 TTC7AQ9ULT0 858 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-207ENST00000484275 PADI3Q9ULW8 664 aa4.09□□□□□ -1.75
SCAF11-207ENST00000484275 TAF1P21675 1872 aa4.09□□□□□ -1.76
SCAF11-207ENST00000484275 TP53BP1Q12888 1972 aaPredicted RBP4.09□□□□□ -1.76
SCAF11-207ENST00000484275 GOLGA6L10A0A0M3HER8 536 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 KRTAP16-1A8MUX0 517 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 IGHV4-39P01824 125 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 HOXC13P31276 330 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 TRAPPC10P48553 1259 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 MMP14P50281 582 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 DRG2P55039 364 aaKnown RBP4.08□□□□□ -1.76
SCAF11-207ENST00000484275 PPP2R5BQ15173 497 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 LPAL2Q16609 132 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 HIST2H2ACQ16777 129 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-207ENST00000484275 WDR38Q5JTN6 314 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 FBXO47Q5MNV8 452 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 MAP3K21Q5TCX8 1036 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 DUS1LQ6P1R4 473 aaKnown RBP4.08□□□□□ -1.76
SCAF11-207ENST00000484275 SLC27A1Q6PCB7 646 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 ATF7IPQ6VMQ6 1270 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 BBS12Q6ZW61 710 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 APLFQ8IW19 511 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-207ENST00000484275 ENAHQ8N8S7 591 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-207ENST00000484275 C11orf65Q8NCR3 313 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 ZNF248Q8NDW4 579 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 OR5R1Q8NH85 324 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 GRAMD2BQ96HH9 432 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 FAM110AQ9BQ89 295 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 TFB2MQ9H5Q4 396 aaKnown RBP4.08□□□□□ -1.76
SCAF11-207ENST00000484275 ZNF624Q9P2J8 865 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-207ENST00000484275 HSF4Q9ULV5 492 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 SMAD5-AS1Q9Y6J3 95 aa4.08□□□□□ -1.76
SCAF11-207ENST00000484275 SMIM1B2RUZ4 78 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 TAF4O00268 1085 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 IRAK2O43187 625 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 PCDH7O60245 1069 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 ARL4CP56559 192 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 EEF1A1P68104 462 aaKnown RBP4.07□□□□□ -1.76
SCAF11-207ENST00000484275 SORDQ00796 357 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 RUNX1T1Q06455 604 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 EEF1A1P5Q5VTE0 462 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 GGNBP1Q5YKI7 109 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 OR7E24Q6IFN5 339 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 BRAT1Q6PJG6 821 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 C15orf39Q6ZRI6 1047 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.07□□□□□ -1.76
SCAF11-207ENST00000484275 ACVR1CQ8NER5 493 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 OR52I2Q8NH67 350 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 PABPC5Q96DU9 382 aaKnown RBP4.07□□□□□ -1.76
SCAF11-207ENST00000484275 SLC41A2Q96JW4 573 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 NEUROD6Q96NK8 337 aa4.07□□□□□ -1.76
SCAF11-207ENST00000484275 BEX4Q9NWD9 120 aaPredicted RBP4.07□□□□□ -1.76
SCAF11-207ENST00000484275 PTPRCP08575 1304 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 IGLV5-45A0A087WSX0 123 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 ZNHIT1O43257 154 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 GPD2P43304 727 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 CCR5P51681 352 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 GAGE5Q13069 117 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 GAGE6Q13070 117 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 NAE1Q13564 534 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 SFMBT2Q5VUG0 894 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 ATG16L1Q676U5 607 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 SLC22A25Q6T423 547 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 BEST3Q8N1M1 668 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 STPG4Q8N801 248 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 FCAMRQ8WWV6 532 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 TMEM190Q8WZ59 177 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 TM9SF4Q92544 642 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 SCRN2Q96FV2 425 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 EGFL8Q99944 293 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 PYM1Q9BRP8 204 aaKnown RBP4.06□□□□□ -1.76
SCAF11-207ENST00000484275 SEBOXQ9HB31 216 aaPredicted RBP4.06□□□□□ -1.76
SCAF11-207ENST00000484275 SLC52A3Q9NQ40 469 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 TMEM160Q9NX00 188 aa4.06□□□□□ -1.76
SCAF11-207ENST00000484275 PRKNO60260 465 aaPredicted RBP4.05□□□□□ -1.76
SCAF11-207ENST00000484275 ERVK-10P10266 1014 aa4.05□□□□□ -1.76
SCAF11-207ENST00000484275 CHRNB4P30926 498 aa4.05□□□□□ -1.76
SCAF11-207ENST00000484275 CDH15P55291 814 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms