RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 CDH13P55290 713 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 ATP6V0D1P61421 351 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 NAA20P61599 178 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 TIAL1Q01085 375 aaKnown RBP eCLIP19.65■□□□□ 0.74
LIMS2-215ENST00000484252 FOXM1Q08050 763 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 CACNB2Q08289 660 aaPredicted RBP19.65■□□□□ 0.74
LIMS2-215ENST00000484252 MYBPC3Q14896 1274 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 SDHAF4Q5VUM1 108 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 RAP1GAP2Q684P5 730 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 HMBOX1Q6NT76 420 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 PPP4R4Q6NUP7 873 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 ERMP1Q7Z2K6 904 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 RETREG3Q86VR2 466 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 TSPAN14Q8NG11 270 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 BLOC1S5Q8TDH9 187 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 EXT2Q93063 718 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 ATOH8Q96SQ7 321 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 SYTL2Q9HCH5 934 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 PNPLA3Q9NST1 481 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 PCDHB5Q9Y5E4 795 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 DOCK4Q8N1I0 1966 aa19.65■□□□□ 0.74
LIMS2-215ENST00000484252 TTC24A2A3L6 582 aaPredicted RBP19.64■□□□□ 0.74
LIMS2-215ENST00000484252 PIP5K1BO14986 540 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 ANGPT2O15123 496 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 PRAMEF11O60813 436 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 HSD17B1P14061 328 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 LBPP18428 481 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 MTA1Q13330 715 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 ZNF235Q14590 738 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 OR4D1Q15615 310 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 GEN1Q17RS7 908 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 TYSND1Q2T9J0 566 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 ISLR2Q6UXK2 745 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 ZBTB49Q6ZSB9 765 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 PHYKPLQ8IUZ5 450 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 RYBPQ8N488 228 aaPredicted RBP19.64■□□□□ 0.74
LIMS2-215ENST00000484252 SNX31Q8N9S9 440 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 OR4L1Q8NH43 312 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 TSPEARQ8WU66 669 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 PPWD1Q96BP3 646 aaKnown RBP19.64■□□□□ 0.74
LIMS2-215ENST00000484252 ZNF599Q96NL3 588 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 TCF12Q99081 682 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 NOL11Q9H8H0 719 aaKnown RBP19.64■□□□□ 0.74
LIMS2-215ENST00000484252 CCM2LQ9NUG4 571 aaPredicted RBP19.64■□□□□ 0.74
LIMS2-215ENST00000484252 GALNT8Q9NY28 637 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 MAP10Q9P2G4 905 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 ARL5AQ9Y689 179 aa19.64■□□□□ 0.74
LIMS2-215ENST00000484252 FAM92AA1XBS5 289 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 MOXD2PA6NHM9 499 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 MANSC4A6NHS7 340 aaPredicted RBP19.64■□□□□ 0.73
LIMS2-215ENST00000484252 ZNF839A8K0R7 811 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 UBXN8O00124 270 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 ZSCAN9O15535 394 aaPredicted RBP19.64■□□□□ 0.73
LIMS2-215ENST00000484252 HNRNPRO43390 633 aaKnown RBP19.64■□□□□ 0.73
LIMS2-215ENST00000484252 ASLP04424 464 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 CYBAP13498 195 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 MTHFD2P13995 350 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 ZNF23P17027 643 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 GPR15P49685 360 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 STC1P52823 247 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 INPP5AQ14642 412 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 PFKFB4Q16877 469 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 GLB1LQ6UWU2 654 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 AMIGO2Q86SJ2 522 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 SH3RF2Q8TEC5 729 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 RPRD1AQ96P16 312 aaPredicted RBP19.64■□□□□ 0.73
LIMS2-215ENST00000484252 TMEM79Q9BSE2 394 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 ANKRD60Q9BZ19 345 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 SDR39U1Q9NRG7 319 aaPredicted RBP19.64■□□□□ 0.73
LIMS2-215ENST00000484252 DNAAF2Q9NVR5 837 aaKnown RBP19.64■□□□□ 0.73
LIMS2-215ENST00000484252 MYRFQ9Y2G1 1151 aa19.64■□□□□ 0.73
LIMS2-215ENST00000484252 HTRA2O43464 458 aaPredicted RBP19.63■□□□□ 0.73
LIMS2-215ENST00000484252 KERAO60938 352 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 IGLV3-27P01718 113 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 GFAPP14136 432 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 IDO1P14902 403 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 GRIA3P42263 894 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 EML3Q32P44 896 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 FAM26DQ5JW98 314 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 KRT80Q6KB66 452 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 STAG3L4Q8TBR4 150 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 KIAA1191Q96A73 305 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 PLEKHG4BQ96PX9 1271 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 SLC29A1Q99808 456 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 CIB1Q99828 191 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 DERL2Q9GZP9 239 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.63■□□□□ 0.73
LIMS2-215ENST00000484252 MARCH2Q9P0N8 246 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 SQORQ9Y6N5 450 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 H3BNH8 94 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 NME4O00746 187 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 SIX3O95343 332 aaPredicted RBP19.63■□□□□ 0.73
LIMS2-215ENST00000484252 ATP6V1B2P21281 511 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 FGFR3P22607 806 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 OR1E1P30953 314 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 MRPL19P49406 292 aaKnown RBP19.63■□□□□ 0.73
LIMS2-215ENST00000484252 DSC1Q08554 894 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 LCP2Q13094 533 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 SEMA3AQ14563 771 aa19.63■□□□□ 0.73
LIMS2-215ENST00000484252 INTS11Q5TA45 600 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms