RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CLEC17AQ6ZS10 378 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 SEPT14Q6ZU15 432 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 MOB3CQ70IA8 216 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 KCTD9Q7L273 389 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 HIST3H2AQ7L7L0 130 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 RNF144BQ7Z419 303 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 CENPVQ7Z7K6 275 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-214ENST00000483925 LAS2Q8IYD9 372 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 SCAIQ8N9R8 606 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 OR7G3Q8NG95 312 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 CFAP61Q8NHU2 1237 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 FAM216AQ8WUB2 273 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 CTNNBL1Q8WYA6 563 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-214ENST00000483925 RMDN2Q96LZ7 410 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 CEP295NLQ96MC4 621 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 ZNF558Q96NG5 402 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 FYTTD1Q96QD9 318 aaKnown RBP4.51□□□□□ -1.69
PTCD3-214ENST00000483925 CTAGE1Q96RT6 745 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 CDRT15Q96T59 188 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 RNF26Q9BY78 433 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-214ENST00000483925 ACTRT3Q9BYD9 372 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 TRIM6Q9C030 488 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-214ENST00000483925 DPH5Q9H2P9 285 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 DNAJC18Q9H819 358 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 ANKZF1Q9H8Y5 726 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 IARS2Q9NSE4 1012 aaKnown RBP4.51□□□□□ -1.69
PTCD3-214ENST00000483925 ABHD10Q9NUJ1 306 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 KCTD5Q9NXV2 234 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 AATFQ9NY61 560 aaKnown RBP eCLIP4.51□□□□□ -1.69
PTCD3-214ENST00000483925 HMG20BQ9P0W2 317 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 PTGFRNQ9P2B2 879 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 UPB1Q9UBR1 384 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 KCNE5Q9UJ90 142 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 HPCAL4Q9UM19 191 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 STX8Q9UNK0 236 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 EXOC7Q9UPT5 735 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 ZNF148Q9UQR1 794 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 B3GNT3Q9Y2A9 372 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 MAU2Q9Y6X3 613 aa4.51□□□□□ -1.69
PTCD3-214ENST00000483925 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 GRID2IPA4D2P6 1211 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 SPRY1O43609 319 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 VEGFDO43915 354 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 USP12O75317 370 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 DAB1O75553 588 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 SCAF4O95104 1147 aaKnown RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 LETM1O95202 739 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 BCL10O95999 233 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 MT-CYBP00156 380 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 IL1AP01583 271 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 CCDC192P0DO97 292 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 GHRP10912 638 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 KLRC2P26717 231 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 CTNNB1P35222 781 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 PTPN9P43378 593 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 AGTR2P50052 363 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 SUOXP51687 545 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 NME5P56597 212 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 FAM189BP81408 668 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 MRPS21P82921 87 aaKnown RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 SHC2P98077 582 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 SP2Q02086 613 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 NHLH2Q02577 135 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 RBPJQ06330 500 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 PTPRCAPQ14761 206 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 GLE1Q53GS7 698 aaKnown RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 MDH1BQ5I0G3 518 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 DNTTIP2Q5QJE6 756 aaKnown RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 RARS2Q5T160 578 aaKnown RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 C6orf163Q5TEZ5 329 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 SHEQ5VZ18 495 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 METRNLQ641Q3 311 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 FAM91A1Q658Y4 838 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 KYAT3Q6YP21 454 aaKnown RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 RGS9BPQ6ZS82 235 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 PTCHD4Q6ZW05 846 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 PLEKHM3Q6ZWE6 761 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 C4orf19Q8IY42 314 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 CCDC13Q8IYE1 715 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 SCYL3Q8IZE3 742 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 KDM1BQ8NB78 822 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 HJURPQ8NCD3 748 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 NEK11Q8NG66 645 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 ST7LQ8TDW4 575 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 GDPD5Q8WTR4 605 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 SHC3Q92529 594 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 AKAP1Q92667 903 aaKnown RBP eCLIP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 DNASE1L2Q92874 299 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 TMEM125Q96AQ2 219 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 BBS4Q96RK4 519 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 KCNK16Q96T55 309 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 HNRNPABQ99729 332 aaKnown RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 TXN2Q99757 166 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 INPP5KQ9BT40 448 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 TRIM7Q9C029 511 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 ZNF350Q9GZX5 532 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 SPATC1LQ9H0A9 340 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 RWDD1Q9H446 243 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-214ENST00000483925 TOR3AQ9H497 397 aa4.5□□□□□ -1.69
PTCD3-214ENST00000483925 GOLPH3LQ9H4A5 285 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms