RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 A0A1W2PQ67 120 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 MYO1FO00160 1098 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 PDE2AO00408 941 aaPredicted RBP17.96■□□□□ 0.47
ATG4B-221ENST00000483778 PPM1DO15297 605 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 NUDT21O43809 227 aaKnown RBP17.96■□□□□ 0.47
ATG4B-221ENST00000483778 PRAMEF10O60809 474 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 CYP2A6P11509 494 aaPredicted RBP17.96■□□□□ 0.47
ATG4B-221ENST00000483778 ALDH4A1P30038 563 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 GARSP41250 739 aaKnown RBP17.96■□□□□ 0.47
ATG4B-221ENST00000483778 PAFAH1B3Q15102 231 aaKnown RBP17.96■□□□□ 0.47
ATG4B-221ENST00000483778 LRRC66Q68CR7 880 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 RAET1GQ6H3X3 334 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 CCDC81Q6ZN84 652 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 ZFAND4Q86XD8 727 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 NAGSQ8N159 534 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 PQLC3Q8N755 202 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 ARRDC2Q8TBH0 407 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 MAML1Q92585 1016 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 USP7Q93009 1102 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 CCDC97Q96F63 343 aaPredicted RBP17.96■□□□□ 0.47
ATG4B-221ENST00000483778 CCNL2Q96S94 520 aaPredicted RBP17.96■□□□□ 0.47
ATG4B-221ENST00000483778 NUDT22Q9BRQ3 303 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 TRNAU1APQ9NX07 287 aaKnown RBP17.96■□□□□ 0.47
ATG4B-221ENST00000483778 FOXJ2Q9P0K8 574 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 IFNKQ9P0W0 207 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 SLC17A4Q9Y2C5 497 aa17.96■□□□□ 0.47
ATG4B-221ENST00000483778 TRBV23OR9-2A0A075B6M9 112 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 C9orf172C9J069 976 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 TMX2-CTNND1H3BSU7 103 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 EML2O95834 649 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 JMJD7P0C870 316 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 CCL4P13236 92 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 WT1P19544 449 aaPredicted RBP17.95■□□□□ 0.46
ATG4B-221ENST00000483778 CD1CP29017 333 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 GBE1Q04446 702 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 DPTQ07507 201 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 ANKRD20A8PQ5CZ79 823 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 PHF19Q5T6S3 580 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 NKAIN2Q5VXU1 208 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 ZNF438Q7Z4V0 828 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 ZNF605Q86T29 641 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 BBS5Q8N3I7 341 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 NSMCE1Q8WV22 266 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 SCARF2Q96GP6 870 aaPredicted RBP17.95■□□□□ 0.46
ATG4B-221ENST00000483778 WDR24Q96S15 920 aa17.95■□□□□ 0.46
ATG4B-221ENST00000483778 RBM22Q9NW64 420 aaKnown RBP eCLIP17.95■□□□□ 0.46
ATG4B-221ENST00000483778 A0A0J9YYE9 177 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 PSMD11O00231 422 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 MATN3O15232 486 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 NVLO15381 856 aaKnown RBP17.94■□□□□ 0.46
ATG4B-221ENST00000483778 CLDN7O95471 211 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 TRBC1P01850 177 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 IVLP07476 585 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 CASP14P31944 242 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 SERPINB6P35237 376 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 GPR1P46091 355 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 MAPK10P53779 464 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 ILF3Q12906 894 aaKnown RBP eCLIP17.94■□□□□ 0.46
ATG4B-221ENST00000483778 EIF3IQ13347 325 aaKnown RBP17.94■□□□□ 0.46
ATG4B-221ENST00000483778 TSR1Q2NL82 804 aaKnown RBP17.94■□□□□ 0.46
ATG4B-221ENST00000483778 RALGPS1Q5JS13 557 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 USP45Q70EL2 814 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 MARK2Q7KZI7 788 aaKnown RBP17.94■□□□□ 0.46
ATG4B-221ENST00000483778 EXD3Q8N9H8 876 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 RCBTB1Q8NDN9 531 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 ZNF564Q8TBZ8 553 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-221ENST00000483778 KIAA1524Q8TCG1 905 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 PMEPA1Q969W9 287 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 AP2M1Q96CW1 435 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 WBP1Q96G27 269 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 TSGA13Q96PP4 275 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 RIOK2Q9BVS4 552 aaKnown RBP17.94■□□□□ 0.46
ATG4B-221ENST00000483778 GSDMCQ9BYG8 508 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.94■□□□□ 0.46
ATG4B-221ENST00000483778 RCOR3Q9P2K3 495 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-221ENST00000483778 ACSL6Q9UKU0 697 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 CNOT6Q9ULM6 557 aaKnown RBP17.94■□□□□ 0.46
ATG4B-221ENST00000483778 LUC7L2Q9Y383 392 aaKnown RBP17.94■□□□□ 0.46
ATG4B-221ENST00000483778 PRKAB1Q9Y478 270 aa17.94■□□□□ 0.46
ATG4B-221ENST00000483778 FLNBO75369 2602 aaKnown RBP17.93■□□□□ 0.46
ATG4B-221ENST00000483778 IGHV5-10-1A0A0J9YXX1 117 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 RHPN2P1A8MT19 583 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 PYCARD-AS1I3L0S3 204 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 INPP4BO15327 924 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 PROSCO94903 275 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 HLA-DQB2P05538 268 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 MMP2P08253 660 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 MPSTP25325 297 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 TEAD1P28347 426 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 ARSDP51689 593 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 STC1P52823 247 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 NR1D2Q14995 579 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 PYCR3Q53H96 274 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 ALG1LQ6GMV1 187 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 ADAMTSL4Q6UY14 1074 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 VASH2Q86V25 355 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 PIM3Q86V86 326 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 ZNF761Q86XN6 746 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-221ENST00000483778 KCTD6Q8NC69 237 aa17.93■□□□□ 0.46
ATG4B-221ENST00000483778 RAPGEF5Q92565 580 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms