RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 CDK3Q00526 305 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 MSLNQ13421 630 aaPredicted RBP16.21■□□□□ 0.19
COL2A1-206ENST00000483376 SEMA5AQ13591 1074 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 PRAMEF14Q5SWL7 426 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 DENND2CQ68D51 928 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 RAET1GQ6H3X3 334 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 DENND5AQ6IQ26 1287 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 KDM7AQ6ZMT4 941 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 TTC30BQ8N4P2 665 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 CCDC89Q8N998 374 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 OR56A4Q8NGH8 313 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 COG1Q8WTW3 980 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 SCARF2Q96GP6 870 aaPredicted RBP16.21■□□□□ 0.19
COL2A1-206ENST00000483376 TBL1YQ9BQ87 522 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 FICDQ9BVA6 458 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 GPR63Q9BZJ6 419 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 FAM83DQ9H4H8 585 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 DNAJC28Q9NX36 388 aa16.21■□□□□ 0.19
COL2A1-206ENST00000483376 A0A0U1RQS6 177 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 NEMP2A6NFY4 417 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 TPP1O14773 563 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 RASGRP1O95267 797 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 AGTP01019 485 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 PIRTP0C851 137 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 JUNDP17535 347 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 GPR1P46091 355 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 HK3P52790 923 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 PDE1BQ01064 536 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 PPARDQ03181 441 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 BNIP3Q12983 259 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 SNX1Q13596 522 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 ALG11Q2TAA5 492 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 RFLNAQ6ZTI6 216 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 DGLUCYQ7Z3D6 616 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 LINC00523Q86TU6 105 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 HEATR4Q86WZ0 1026 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 PHACTR4Q8IZ21 702 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 BRSK1Q8TDC3 778 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 SCAMP4Q969E2 229 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 COX14Q96I36 57 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 NAPGQ99747 312 aaPredicted RBP16.2■□□□□ 0.18
COL2A1-206ENST00000483376 ZSCAN5AQ9BUG6 496 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 FRMD8Q9BZ67 464 aaPredicted RBP16.2■□□□□ 0.18
COL2A1-206ENST00000483376 IL17CQ9P0M4 197 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 KLF15Q9UIH9 416 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 PNMA8BQ9ULN7 279 aaPredicted RBP16.2■□□□□ 0.18
COL2A1-206ENST00000483376 SHOC2Q9UQ13 582 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 SLC17A4Q9Y2C5 497 aa16.2■□□□□ 0.18
COL2A1-206ENST00000483376 DCDC2BA2VCK2 349 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 TMEM202A6NGA9 273 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 F5H423 210 aaPredicted RBP16.19■□□□□ 0.18
COL2A1-206ENST00000483376 SCAMP1O15126 338 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 IFNB1P01574 187 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 BPIP17213 487 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 FNTAP49354 379 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 NOVA1P51513 510 aaKnown RBP16.19■□□□□ 0.18
COL2A1-206ENST00000483376 SRP54P61011 504 aaKnown RBP16.19■□□□□ 0.18
COL2A1-206ENST00000483376 IL9RQ01113 521 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 TAF1AQ15573 450 aaPredicted RBP16.19■□□□□ 0.18
COL2A1-206ENST00000483376 ENPP7Q6UWV6 458 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 GLT6D1Q7Z4J2 308 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 SLC25A45Q8N413 288 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 FSTL5Q8N475 847 aaPredicted RBP16.19■□□□□ 0.18
COL2A1-206ENST00000483376 SLC25A41Q8N5S1 370 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 TRAM1L1Q8N609 369 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 ZNF548Q8NEK5 533 aaPredicted RBP16.19■□□□□ 0.18
COL2A1-206ENST00000483376 DEFB124Q8NES8 71 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 OR4C6Q8NH72 309 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 MS4A14Q96JA4 679 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 DUSP23Q9BVJ7 150 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 RIOK2Q9BVS4 552 aaKnown RBP16.19■□□□□ 0.18
COL2A1-206ENST00000483376 LGR4Q9BXB1 951 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 SLC13A1Q9BZW2 595 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 ETNK1Q9HBU6 452 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 EIF2B3Q9NR50 452 aaKnown RBP16.19■□□□□ 0.18
COL2A1-206ENST00000483376 NLGN3Q9NZ94 848 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 SPASTQ9UBP0 616 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 RNF14Q9UBS8 474 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 KLQ9UEF7 1012 aa16.19■□□□□ 0.18
COL2A1-206ENST00000483376 APOBEC3BQ9UH17 382 aaKnown RBP16.19■□□□□ 0.18
COL2A1-206ENST00000483376 ARID1BQ8NFD5 2236 aaPredicted RBP16.19■□□□□ 0.18
COL2A1-206ENST00000483376 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.18■□□□□ 0.18
COL2A1-206ENST00000483376 GOLGA6L10A0A0M3HER8 536 aa16.18■□□□□ 0.18
COL2A1-206ENST00000483376 CTAGE9A4FU28 777 aa16.18■□□□□ 0.18
COL2A1-206ENST00000483376 LMO7DNF2Z398 122 aa16.18■□□□□ 0.18
COL2A1-206ENST00000483376 AURKAO14965 403 aa16.18■□□□□ 0.18
COL2A1-206ENST00000483376 AQP9O43315 295 aa16.18■□□□□ 0.18
COL2A1-206ENST00000483376 IVLP07476 585 aa16.18■□□□□ 0.18
COL2A1-206ENST00000483376 GIMD1P0DJR0 217 aa16.18■□□□□ 0.18
COL2A1-206ENST00000483376 PSMA3P25788 255 aa16.18■□□□□ 0.18
COL2A1-206ENST00000483376 RPL22P35268 128 aaKnown RBP16.18■□□□□ 0.18
COL2A1-206ENST00000483376 HS1BP3Q53T59 392 aa16.18■□□□□ 0.18
COL2A1-206ENST00000483376 LVRNQ6Q4G3 990 aa16.18■□□□□ 0.18
COL2A1-206ENST00000483376 GATAD2AQ86YP4 633 aa16.18■□□□□ 0.18
COL2A1-206ENST00000483376 PDCD7Q8N8D1 485 aaKnown RBP16.18■□□□□ 0.18
COL2A1-206ENST00000483376 FAM181AQ8N9Y4 354 aa16.18■□□□□ 0.18
COL2A1-206ENST00000483376 GLIS1Q8NBF1 620 aa16.18■□□□□ 0.18
COL2A1-206ENST00000483376 GPR26Q8NDV2 337 aa16.18■□□□□ 0.18
COL2A1-206ENST00000483376 BLOC1S5Q8TDH9 187 aa16.18■□□□□ 0.18
COL2A1-206ENST00000483376 RHBDD1Q8TEB9 315 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms