RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 SLC15A4Q8N697 577 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 ZNF555Q8NEP9 628 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 OR13C4Q8NGS5 318 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 HPS1Q92902 700 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 HGH1Q9BTY7 390 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 APOL5Q9BWW9 433 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 SMURF2Q9HAU4 748 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 AFF4Q9UHB7 1163 aaKnown RBP12.68□□□□□ -0.38
VPS52-218ENST00000482399 J3KR12 359 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 SOCS7O14512 581 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 UBFD1O14562 309 aaKnown RBP12.68□□□□□ -0.38
VPS52-218ENST00000482399 FFAR3O14843 346 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 GPR42O15529 346 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 CAPGP40121 348 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 CLCN2P51788 898 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 DGKQP52824 942 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 SLC10A7Q0GE19 358 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 DNASE1L3Q13609 305 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 TSNQ15631 228 aaKnown RBP12.68□□□□□ -0.38
VPS52-218ENST00000482399 PPP4R4Q6NUP7 873 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 ZBTB8BQ8NAP8 495 aaPredicted RBP12.68□□□□□ -0.38
VPS52-218ENST00000482399 CLHC1Q8NHS4 586 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 SGCDQ92629 289 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 EGFL8Q99944 293 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 PAAF1Q9BRP4 392 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 ANKRD60Q9BZ19 345 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 RAD21L1Q9H4I0 556 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 ZFP14Q9HCL3 533 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 WDR6Q9NNW5 1121 aaKnown RBP12.68□□□□□ -0.38
VPS52-218ENST00000482399 BPIFA1Q9NP55 256 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 POLE4Q9NR33 117 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 INTS7Q9NVH2 962 aaKnown RBP12.68□□□□□ -0.38
VPS52-218ENST00000482399 DUS2Q9NX74 493 aaKnown RBP12.68□□□□□ -0.38
VPS52-218ENST00000482399 FAM8A1Q9UBU6 413 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 TBC1D30Q9Y2I9 924 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 ARL5AQ9Y689 179 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 LINC00854A0A1B0GVQ3 168 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 FYNP06241 537 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 RFTN1Q14699 578 aaPredicted RBP12.68□□□□□ -0.38
VPS52-218ENST00000482399 AASDHQ4L235 1098 aaPredicted RBP12.68□□□□□ -0.38
VPS52-218ENST00000482399 NHSL2Q5HYW2 709 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 PAGE2BQ5JRK9 111 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 OTUD1Q5VV17 481 aaPredicted RBP12.68□□□□□ -0.38
VPS52-218ENST00000482399 ANKS6Q68DC2 871 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 TAF2Q6P1X5 1199 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 SLC2A7Q6PXP3 512 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 CRTC3Q6UUV7 619 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 TICAM1Q8IUC6 712 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 ARRDC4Q8NCT1 418 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 CDCA5Q96FF9 252 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 GLT1D1Q96MS3 346 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 CMTM6Q9NX76 183 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 AASSQ9UDR5 926 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 BAG5Q9UL15 447 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 ORC6Q9Y5N6 252 aa12.68□□□□□ -0.38
VPS52-218ENST00000482399 NUP214P35658 2090 aaPredicted RBP12.67□□□□□ -0.38
VPS52-218ENST00000482399 GJB3O75712 270 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 AGTR2P50052 363 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 CLCN5P51795 746 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 ZRANB3Q5FWF4 1079 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 BNIPLQ7Z465 357 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 FUNDC1Q8IVP5 155 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 BBS5Q8N3I7 341 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 ITCHQ96J02 903 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 SEMA3CQ99985 751 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 RPF2Q9H7B2 306 aaKnown RBP12.67□□□□□ -0.38
VPS52-218ENST00000482399 CNGB3Q9NQW8 809 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 GMEB1Q9Y692 573 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 NRCAMQ92823 1304 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 BNIP3LO60238 219 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 DEAF1O75398 565 aaPredicted RBP12.67□□□□□ -0.38
VPS52-218ENST00000482399 CDK14O94921 469 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 ESRRBO95718 433 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 THP07101 528 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 C8BP07358 591 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 DARSP14868 501 aaKnown RBP12.67□□□□□ -0.38
VPS52-218ENST00000482399 TRAP1Q12931 704 aaKnown RBP12.67□□□□□ -0.38
VPS52-218ENST00000482399 MEP1AQ16819 746 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 FAM187BQ17R55 369 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 MRNIPQ6NTE8 343 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 IL27RAQ6UWB1 636 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 PRR23BQ6ZRT6 265 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 SPATA2LQ8IUW3 424 aaPredicted RBP12.67□□□□□ -0.38
VPS52-218ENST00000482399 RBM12BQ8IXT5 1001 aaKnown RBP12.67□□□□□ -0.38
VPS52-218ENST00000482399 ANKRD13AQ8IZ07 590 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 ZCCHC7Q8N3Z6 543 aaKnown RBP12.67□□□□□ -0.38
VPS52-218ENST00000482399 TRPV3Q8NET8 790 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 METTL6Q8TCB7 284 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 SH3RF2Q8TEC5 729 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 MTFMTQ96DP5 389 aaKnown RBP12.67□□□□□ -0.38
VPS52-218ENST00000482399 IGSF5Q9NSI5 407 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 CCM2LQ9NUG4 571 aaPredicted RBP12.67□□□□□ -0.38
VPS52-218ENST00000482399 FAIMQ9NVQ4 179 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.67□□□□□ -0.381e-7■■■□□ 19.2
VPS52-218ENST00000482399 ZNF510Q9Y2H8 683 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 A0A0U1RQS6 177 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 MOXD2PA6NHM9 499 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 SLC22A2O15244 555 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 SNAP91O60641 907 aa12.67□□□□□ -0.38
VPS52-218ENST00000482399 SMIM10L2AP0DMW4 78 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms