RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 CEP295Q9C0D2 2601 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 GRID2IPA4D2P6 1211 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 RGSL1A5PLK6 1076 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 SRRM3A6NNA2 597 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-213ENST00000482192 HACD1B0YJ81 288 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 CEACAM5P06731 702 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 PTPN7P35236 360 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 CETN2P41208 172 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 RWDD2BP57060 319 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 CDK18Q07002 472 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 WASHC5Q12768 1159 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 ILF3Q12906 894 aaKnown RBP eCLIP11.84□□□□□ -0.51
HMGN1-213ENST00000482192 XRCC4Q13426 336 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 CCDC181Q5TID7 509 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 CCDC70Q6NSX1 233 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 KDELC2Q7Z4H8 507 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 TAF8Q7Z7C8 310 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 SYCE1Q8N0S2 351 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 KYQ8NBH2 561 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 FAM46DQ8NEK8 389 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 SPATA22Q8NHS9 363 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 WDR48Q8TAF3 677 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 HTR3CQ8WXA8 447 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 HIC2Q96JB3 615 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 DESI2Q9BSY9 194 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 RIOK2Q9BVS4 552 aaKnown RBP11.84□□□□□ -0.51
HMGN1-213ENST00000482192 MAGEE1Q9HCI5 957 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 TRNAU1APQ9NX07 287 aaKnown RBP11.84□□□□□ -0.51
HMGN1-213ENST00000482192 KLHL8Q9P2G9 620 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-213ENST00000482192 GULP1Q9UBP9 304 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 CHD8Q9HCK8 2581 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 LRP4O75096 1905 aa11.84□□□□□ -0.51
HMGN1-213ENST00000482192 MACROD2A1Z1Q3 448 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 PMPCBO75439 489 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 NDST3O95803 873 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 MT-CYBP00156 380 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-213ENST00000482192 IVLP07476 585 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 NFKB1P19838 968 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 TNNT3P45378 269 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-213ENST00000482192 GNPDA1P46926 289 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 SPINT3P49223 89 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 GSDMDP57764 484 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 CYP4F3Q08477 520 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 NOMO1Q15155 1222 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 PERM1Q5SV97 790 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 FAM182AQ5T1J6 154 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 DOK6Q6PKX4 331 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 LYSMD3Q7Z3D4 306 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 PEX26Q7Z412 305 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 OR6C4Q8NGE1 309 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 GPBAR1Q8TDU6 330 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 SRPK1Q96SB4 655 aaKnown RBP11.83□□□□□ -0.52
HMGN1-213ENST00000482192 CCDC3Q9BQI4 270 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 FERMT1Q9BQL6 677 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 GSDMCQ9BYG8 508 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 OSBPL8Q9BZF1 889 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 CDH19Q9H159 772 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 DPEP2Q9H4A9 486 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 FAM83DQ9H4H8 585 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 ZFYVE1Q9HBF4 777 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 FAM153AQ9UHL3 310 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 TRHDEQ9UKU6 1024 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 SUFUQ9UMX1 484 aa11.83□□□□□ -0.52
HMGN1-213ENST00000482192 PLXNB3Q9ULL4 1909 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 MIF4GDA9UHW6 222 aaKnown RBP11.82□□□□□ -0.52
HMGN1-213ENST00000482192 B4DGG1 531 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 H7C0C1 242 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 TAF4O00268 1085 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 CSO75390 466 aaKnown RBP11.82□□□□□ -0.52
HMGN1-213ENST00000482192 TCEA3O75764 348 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 KRT37O76014 449 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 TJP3O95049 919 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 FUCA1P04066 466 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 CD68P34810 354 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-213ENST00000482192 ATP5OP48047 213 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 POLD2P49005 469 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 PEX6Q13608 980 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 RTP5Q14D33 572 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 HENMT1Q5T8I9 393 aaKnown RBP11.82□□□□□ -0.52
HMGN1-213ENST00000482192 OGFOD3Q6PK18 319 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 RBM44Q6ZP01 1051 aaKnown RBP11.82□□□□□ -0.52
HMGN1-213ENST00000482192 PID1Q7Z2X4 250 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 TRIM74Q86UV6 250 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 CDKL3Q8IVW4 592 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-213ENST00000482192 ZNF567Q8N184 647 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 UBL4BQ8N7F7 174 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 GPR156Q8NFN8 814 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 CCL4L1Q8NHW4 92 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 ACTL9Q8TC94 416 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 ALG3Q92685 438 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 CCDC74AQ96AQ1 378 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 GRAMD1AQ96CP6 724 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 SCARF2Q96GP6 870 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-213ENST00000482192 COX14Q96I36 57 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 OR2M4Q96R27 311 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 FCRL5Q96RD9 977 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 AGAP2Q99490 1192 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 SUDS3Q9H7L9 328 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-213ENST00000482192 RAD18Q9NS91 495 aa11.82□□□□□ -0.52
HMGN1-213ENST00000482192 UBP1Q9NZI7 540 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms