RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 SPRED1Q7Z699 444 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 TAF8Q7Z7C8 310 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 B3GNT8Q7Z7M8 397 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 CCDC13Q8IYE1 715 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 PTCD2Q8WV60 388 aaKnown RBP9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 SCAMP4Q969E2 229 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 CCDC42Q96M95 316 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 TRIB3Q96RU7 358 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 LGMNQ99538 433 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 DPH1Q9BZG8 443 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 LRRN3Q9H3W5 708 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 THSD1Q9NS62 852 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 ZNHIT6Q9NWK9 470 aaKnown RBP9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 SIRPGQ9P1W8 387 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 DNPEPQ9ULA0 475 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 CHKBQ9Y259 395 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 PCDHGA7Q9Y5G6 932 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 RNF215Q9Y6U7 377 aa9.69□□□□□ -0.86
TMEM39A-207ENST00000482162 MGAQ8IWI9 3026 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 KCNK1O00180 336 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 MAP3K6O95382 1288 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 JCHAINP01591 159 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 PYGLP06737 847 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 ITGA2BP08514 1039 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 ADCY8P40145 1251 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 SLC1A1P43005 524 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 POLD2P49005 469 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 ZBTB17Q13105 803 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 SLC14A2Q15849 920 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 QPCTQ16769 361 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 PYCR3Q53H96 274 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 HENMT1Q5T8I9 393 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 CCNJLQ8IV13 435 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 CNGA4Q8IV77 575 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 SLITRK4Q8IW52 837 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 PAF1Q8N7H5 531 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 EXD1Q8NHP7 514 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 LRRN4Q8WUT4 740 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 TMEM159Q96B96 161 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 AP2M1Q96CW1 435 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 EID2BQ96D98 161 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 IMP4Q96G21 291 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 TMEM74Q96NL1 305 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 GFM1Q96RP9 751 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 UBL7Q96S82 380 aaPredicted RBP9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 AGAP2Q99490 1192 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 GSDMCQ9BYG8 508 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 B3GNT4Q9C0J1 378 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 BRD8Q9H0E9 1235 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 CARS2Q9HA77 564 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 PCDH9Q9HC56 1237 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 SPTLC3Q9NUV7 552 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 HAUS2Q9NVX0 235 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 TAAR2Q9P1P5 351 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 LRIT1Q9P2V4 623 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 SUFUQ9UMX1 484 aa9.68□□□□□ -0.86
TMEM39A-207ENST00000482162 LRRD1A4D1F6 860 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 GOLGA6L3A6NEY3 463 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 PLD2O14939 933 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 ATXN7O15265 892 aaPredicted RBP9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 TNFSF15O95150 251 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 CLDN7O95471 211 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 RPLP0P05388 317 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 ZFXP17010 805 aaPredicted RBP9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 RBMS1P29558 406 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 CDKN2BP42772 138 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 GPR3P46089 330 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 GPR1P46091 355 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 NR2C2P49116 596 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 SPINT3P49223 89 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 INHBCP55103 352 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 CTBSQ01459 385 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 ITKQ08881 620 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 CCDC173Q0VFZ6 552 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 ILF3Q12906 894 aaKnown RBP eCLIP9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 GSE1Q14687 1217 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 PDK1Q15118 436 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 TCEA2Q15560 299 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 C3orf38Q5JPI3 329 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 RAET1GQ6H3X3 334 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 PCSK4Q6UW60 755 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 GPR155Q7Z3F1 870 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 TMPRSS9Q7Z410 1059 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 NAGSQ8N159 534 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 ARL14Q8N4G2 192 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 TC2NQ8N9U0 490 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 KIAA1524Q8TCG1 905 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 RIOK2Q9BVS4 552 aaKnown RBP9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 DPEP2Q9H4A9 486 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 DEF6Q9H4E7 631 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 MAGEE1Q9HCI5 957 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 VPS18Q9P253 973 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 PDP2Q9P2J9 529 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 NFKBIL1Q9UBC1 381 aaPredicted RBP9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 LOC400499M0QZD8 3231 aa9.67□□□□□ -0.86
TMEM39A-207ENST00000482162 GCN1Q92616 2671 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-207ENST00000482162 TEX51A0A1B0GUA7 166 aa9.66□□□□□ -0.86
TMEM39A-207ENST00000482162 A6NCN8 305 aa9.66□□□□□ -0.86
TMEM39A-207ENST00000482162 AKR1B15C9JRZ8 316 aaPredicted RBP9.66□□□□□ -0.86
TMEM39A-207ENST00000482162 APOL1O14791 398 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms