RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 INVSQ9Y283 1065 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 CCDC163A0A0D9SF12 145 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 PRR23AA6NEV1 266 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 SPINT1O43278 529 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 TSPAN6O43657 245 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 AP1G1O43747 822 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 CLDN7O95471 211 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 ZNF16P17020 682 aaPredicted RBP11.58□□□□□ -0.55
HPS4-212ENST00000481910 CD6P30203 668 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 VIPR1P32241 457 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 MMP12P39900 470 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 FNTBP49356 437 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 CARSP49589 748 aaKnown RBP11.58□□□□□ -0.55
HPS4-212ENST00000481910 ADPRHP54922 357 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 MSLNQ13421 630 aaPredicted RBP11.58□□□□□ -0.55
HPS4-212ENST00000481910 CUL1Q13616 776 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 RCN1Q15293 331 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 HIF1AQ16665 826 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 ARMC3Q5W041 872 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 LRRC66Q68CR7 880 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 ZDHHC24Q6UX98 284 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 DPPA4Q7L190 304 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 GLT6D1Q7Z4J2 308 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 TSPAN33Q86UF1 283 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 FAM160A2Q8N612 972 aaPredicted RBP11.58□□□□□ -0.55
HPS4-212ENST00000481910 FRMD1Q8N878 549 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 BRSK1Q8TDC3 778 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 TOE1Q96GM8 510 aaKnown RBP11.58□□□□□ -0.55
HPS4-212ENST00000481910 NAF1Q96HR8 494 aaKnown RBP11.58□□□□□ -0.55
HPS4-212ENST00000481910 WRAP53Q9BUR4 548 aaKnown RBP11.58□□□□□ -0.55
HPS4-212ENST00000481910 GPR63Q9BZJ6 419 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 VCX3BQ9H321 246 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 ANKZF1Q9H8Y5 726 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 ZFYVE1Q9HBF4 777 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 ARGLU1Q9NWB6 273 aaPredicted RBP11.58□□□□□ -0.55
HPS4-212ENST00000481910 FBXO4Q9UKT5 387 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 ZNF711Q9Y462 761 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 SPO11Q9Y5K1 396 aa11.58□□□□□ -0.55
HPS4-212ENST00000481910 IGHV1OR15-9A0A0B4J2B8 117 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 LRRC72A6NJI9 287 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 SDR42E2A6NKP2 422 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 BOLA2-SMG1P6H3BVE0 249 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 AURKAO14965 403 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 SLC4A1P02730 911 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 ELFN1P0C7U0 828 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 TDGF1P13385 188 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 ZNF30P17039 623 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 LHCGRP22888 699 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 MGAT1P26572 445 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 ARL4CP56559 192 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 CRADDP78560 199 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 SEPT6Q14141 434 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 FNBP1LQ5T0N5 605 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 LIPIQ6XZB0 460 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 LYSMD3Q7Z3D4 306 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 CXorf40AQ8TE69 158 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 CENPTQ96BT3 561 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 CABS1Q96KC9 395 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 FAM129AQ9BZQ8 928 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 IL22Q9GZX6 179 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 TRABDQ9H4I3 376 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 ZDHHC18Q9NUE0 388 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 WSB2Q9NYS7 404 aaPredicted RBP11.58□□□□□ -0.56
HPS4-212ENST00000481910 CROTQ9UKG9 612 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 NFU1Q9UMS0 254 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 TRPM6Q9BX84 2022 aa11.58□□□□□ -0.56
HPS4-212ENST00000481910 GOLGA8CPA6NN73 597 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 C2orf81A6NN90 581 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 H0Y858 1186 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 MMP20O60882 483 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 NDUFS2O75306 463 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 ATP6V1G1O75348 118 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 CRTAMO95727 393 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 SEMA4FO95754 770 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 MAGEA3P43357 314 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 LIG3P49916 1009 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 PTSQ03393 145 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 COX10Q12887 443 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 RALGDSQ12967 914 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 TAF1AQ15573 450 aaPredicted RBP11.57□□□□□ -0.56
HPS4-212ENST00000481910 CDKN3Q16667 212 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 MAP7D1Q3KQU3 841 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 BBS9Q3SYG4 887 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 TMEM52BQ4KMG9 183 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 CCDC38Q502W7 563 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 AGAP9Q5VTM2 703 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 CASC4Q6P4E1 433 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 SLC30A9Q6PML9 568 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 LONP2Q86WA8 852 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 ZCCHC9Q8N567 271 aaKnown RBP11.57□□□□□ -0.56
HPS4-212ENST00000481910 SPDYE1Q8NFV5 336 aaPredicted RBP11.57□□□□□ -0.56
HPS4-212ENST00000481910 SPACA7Q96KW9 195 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 GPR174Q9BXC1 333 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 SLC7A5P2Q9GIP4 190 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 PREBQ9HCU5 417 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 DNAAF2Q9NVR5 837 aaKnown RBP11.57□□□□□ -0.56
HPS4-212ENST00000481910 SYBUQ9NX95 663 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 DCAF16Q9NXF7 216 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 UBAP1Q9NZ09 502 aa11.57□□□□□ -0.56
HPS4-212ENST00000481910 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms