RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 LIMK1P53667 647 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 ATXN3P54252 364 aaPredicted RBP19.67■□□□□ 0.74
LIME1-205ENST00000480139 KIAA1024LP59773 190 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 DR1Q01658 176 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 PTK2BQ14289 1009 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 KCNJ11Q14654 390 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 WHAMMP3Q1A5X7 153 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 HLA-BQ31612 363 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 ADAMTSL4Q6UY14 1074 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 PPP1R21Q6ZMI0 780 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 MACC1Q6ZN28 852 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 PELI3Q8N2H9 469 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 OR52K1Q8NGK4 314 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 ZNF592Q92610 1267 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 SCAMP4Q969E2 229 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 RIOK2Q9BVS4 552 aaKnown RBP19.67■□□□□ 0.74
LIME1-205ENST00000480139 TEX101Q9BY14 249 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 WDR26Q9H7D7 661 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 DNAAF2Q9NVR5 837 aaKnown RBP19.67■□□□□ 0.74
LIME1-205ENST00000480139 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.67■□□□□ 0.74
LIME1-205ENST00000480139 CD84Q9UIB8 345 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 PKP3Q9Y446 797 aa19.67■□□□□ 0.74
LIME1-205ENST00000480139 GOLGA8CPA6NN73 597 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 K7ESM1 405 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 CDX4O14627 284 aaPredicted RBP19.66■□□□□ 0.74
LIME1-205ENST00000480139 ZNF883P0CG24 379 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 BPIP17213 487 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 LPOP22079 712 aaPredicted RBP19.66■□□□□ 0.74
LIME1-205ENST00000480139 THOP1P52888 689 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 ARHGAP8P85298 464 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 PDE1CQ14123 709 aaPredicted RBP19.66■□□□□ 0.74
LIME1-205ENST00000480139 NFATC4Q14934 902 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 PDPK2PQ6A1A2 396 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 RAET1GQ6H3X3 334 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 KDM7AQ6ZMT4 941 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 MINDY1Q8N5J2 469 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 DNAAF3Q8N9W5 541 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 GPR26Q8NDV2 337 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 CPT1BQ92523 772 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 ELF4Q99607 663 aaPredicted RBP19.66■□□□□ 0.74
LIME1-205ENST00000480139 ZSCAN5AQ9BUG6 496 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 GTPBP2Q9BX10 602 aaKnown RBP19.66■□□□□ 0.74
LIME1-205ENST00000480139 GAREM1Q9H706 876 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 TMEM9BQ9NQ34 198 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 RXFP3Q9NSD7 469 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 OR1A2Q9Y585 309 aa19.66■□□□□ 0.74
LIME1-205ENST00000480139 LRP4O75096 1905 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 CACNB4O00305 520 aaPredicted RBP19.65■□□□□ 0.74
LIME1-205ENST00000480139 YKT6O15498 198 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 LDB2O43679 373 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 SLC4A1P02730 911 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 MYCLP1P12525 358 aaPredicted RBP19.65■□□□□ 0.74
LIME1-205ENST00000480139 HTR1BP28222 390 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 GRIA1P42261 906 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 GPR1P46091 355 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 RXRGP48443 463 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 LAMB3Q13751 1172 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 FZD2Q14332 565 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 PARGQ86W56 976 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 JAMLQ86YT9 394 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 KIAA2013Q8IYS2 634 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 TRAM1L1Q8N609 369 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 FUBP1Q96AE4 644 aaKnown RBP19.65■□□□□ 0.74
LIME1-205ENST00000480139 RANBP9Q96S59 729 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 KRT12Q99456 494 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 PHPT1Q9NRX4 125 aaPredicted RBP19.65■□□□□ 0.74
LIME1-205ENST00000480139 ASIC3Q9UHC3 531 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 MRFAP1Q9Y605 127 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 ARL5AQ9Y689 179 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 LAMA1P25391 3075 aa19.65■□□□□ 0.74
LIME1-205ENST00000480139 STX7O15400 261 aaKnown RBP19.64■□□□□ 0.73
LIME1-205ENST00000480139 KELP23276 732 aa19.64■□□□□ 0.73
LIME1-205ENST00000480139 HOXD11P31277 338 aaPredicted RBP19.64■□□□□ 0.73
LIME1-205ENST00000480139 SPAM1P38567 509 aa19.64■□□□□ 0.73
LIME1-205ENST00000480139 ADCY8P40145 1251 aa19.64■□□□□ 0.73
LIME1-205ENST00000480139 ARRB1P49407 418 aaPredicted RBP19.64■□□□□ 0.73
LIME1-205ENST00000480139 ZNF140P52738 457 aaPredicted RBP19.64■□□□□ 0.73
LIME1-205ENST00000480139 SARNPP82979 210 aaKnown RBP19.64■□□□□ 0.73
LIME1-205ENST00000480139 CDK3Q00526 305 aa19.64■□□□□ 0.73
LIME1-205ENST00000480139 TPRG1LQ5T0D9 272 aa19.64■□□□□ 0.73
LIME1-205ENST00000480139 ARMC3Q5W041 872 aa19.64■□□□□ 0.73
LIME1-205ENST00000480139 LRRC8BQ6P9F7 803 aa19.64■□□□□ 0.73
LIME1-205ENST00000480139 ZNF534Q76KX8 674 aa19.64■□□□□ 0.73
LIME1-205ENST00000480139 PCGF5Q86SE9 256 aa19.64■□□□□ 0.73
LIME1-205ENST00000480139 HEATR4Q86WZ0 1026 aa19.64■□□□□ 0.73
LIME1-205ENST00000480139 PPIL6Q8IXY8 311 aa19.64■□□□□ 0.73
LIME1-205ENST00000480139 MCUQ8NE86 351 aa19.64■□□□□ 0.73
LIME1-205ENST00000480139 WDR92Q96MX6 357 aa19.64■□□□□ 0.73
LIME1-205ENST00000480139 A0A1B0GTQ1 180 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 TCRBV7S3A2A0A539 114 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 MROH6A6NGR9 719 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 TTI1O43156 1089 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 GDF9O60383 454 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 MLNP12872 115 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 TPH1P17752 444 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 PSMA3P25788 255 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 IVDP26440 423 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 HADHAP40939 763 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 CCT8P50990 548 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 SLC14A1Q13336 389 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms