RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 USP12O75317 370 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 CRTAMO95727 393 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 GAS8O95995 478 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 KRT14P02533 472 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 CSF2P04141 144 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 TUBB4AP04350 444 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 ZSCAN5DPP0CG00 497 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 MYCLP1P12525 358 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-219ENST00000479941 EPHA8P29322 1005 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-219ENST00000479941 GPR1P46091 355 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 KIAA1024LP59773 190 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 DCDC1P59894 354 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 PDE1BQ01064 536 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 CDH17Q12864 832 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 OLIG2Q13516 323 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 SPARCL1Q14515 664 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 NFATC4Q14934 902 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 TPRG1LQ5T0D9 272 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 ZDHHC20Q5W0Z9 365 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 PDPK2PQ6A1A2 396 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 DENND5AQ6IQ26 1287 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 ADAMTSL4Q6UY14 1074 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 KDM7AQ6ZMT4 941 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 DBX2Q6ZNG2 339 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 RFLNAQ6ZTI6 216 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 PRUNE1Q86TP1 453 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 PELI3Q8N2H9 469 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 TTC30BQ8N4P2 665 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 TAB3Q8N5C8 712 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-219ENST00000479941 DTX3LQ8TDB6 740 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 BRSK1Q8TDC3 778 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 FUBP1Q96AE4 644 aaKnown RBP10.79□□□□□ -0.68
ATG4B-219ENST00000479941 WDR92Q96MX6 357 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 PLEKHG4BQ96PX9 1271 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 C19orf43Q9BQ61 176 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 ZSCAN5AQ9BUG6 496 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 RIOK2Q9BVS4 552 aaKnown RBP10.79□□□□□ -0.68
ATG4B-219ENST00000479941 TEX101Q9BY14 249 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 EIF2B3Q9NR50 452 aaKnown RBP10.79□□□□□ -0.68
ATG4B-219ENST00000479941 PHPT1Q9NRX4 125 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-219ENST00000479941 DNAJC28Q9NX36 388 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 DLL3Q9NYJ7 618 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.79□□□□□ -0.68
ATG4B-219ENST00000479941 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.79□□□□□ -0.68
ATG4B-219ENST00000479941 IL17CQ9P0M4 197 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 OR1A2Q9Y585 309 aa10.79□□□□□ -0.68
ATG4B-219ENST00000479941 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.78□□□□□ -0.68
ATG4B-219ENST00000479941 H3BM21 787 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 CCDC188H7C350 402 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 AP3B1O00203 1094 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 TNFRSF10CO14798 259 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 FLRT2O43155 660 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 ECEL1O95672 775 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 SOD1P00441 154 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 SLC4A1P02730 911 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 APRTP07741 180 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 CD59P13987 128 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 NME1P15531 152 aaKnown RBP10.78□□□□□ -0.68
ATG4B-219ENST00000479941 BPIP17213 487 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 LPOP22079 712 aaPredicted RBP10.78□□□□□ -0.68
ATG4B-219ENST00000479941 BLKP51451 505 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 HNRNPKP61978 463 aaKnown RBP eCLIP10.78□□□□□ -0.685e-6■■□□□ 11.6
ATG4B-219ENST00000479941 BASP1P80723 227 aaKnown RBP10.78□□□□□ -0.68
ATG4B-219ENST00000479941 CDK3Q00526 305 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 EIF2B5Q13144 721 aaKnown RBP10.78□□□□□ -0.68
ATG4B-219ENST00000479941 MSLNQ13421 630 aaPredicted RBP10.78□□□□□ -0.68
ATG4B-219ENST00000479941 SHBQ15464 509 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 TAF1AQ15573 450 aaPredicted RBP10.78□□□□□ -0.68
ATG4B-219ENST00000479941 TRIP13Q15645 432 aaPredicted RBP10.78□□□□□ -0.68
ATG4B-219ENST00000479941 INAVAQ3KP66 663 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 HENMT1Q5T8I9 393 aaKnown RBP10.78□□□□□ -0.68
ATG4B-219ENST00000479941 ENPP7Q6UWV6 458 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 PPP1R21Q6ZMI0 780 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 HEATR4Q86WZ0 1026 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 TRAM1L1Q8N609 369 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 DNAAF3Q8N9W5 541 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 GPR26Q8NDV2 337 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 OR56A4Q8NGH8 313 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 SAP25Q8TEE9 199 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 BTN2A2Q8WVV5 523 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 C16orf45Q96MC5 204 aaPredicted RBP10.78□□□□□ -0.68
ATG4B-219ENST00000479941 RUNDC3BQ96NL0 473 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 AGAP2Q99490 1192 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 PCYOX1Q9UHG3 505 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 PKP3Q9Y446 797 aa10.78□□□□□ -0.68
ATG4B-219ENST00000479941 BPTFQ12830 3046 aa10.77□□□□□ -0.68
ATG4B-219ENST00000479941 KIF2AO00139 706 aaPredicted RBP10.77□□□□□ -0.69
ATG4B-219ENST00000479941 TM4SF5O14894 197 aa10.77□□□□□ -0.69
ATG4B-219ENST00000479941 STX7O15400 261 aaKnown RBP10.77□□□□□ -0.69
ATG4B-219ENST00000479941 JUNDP17535 347 aa10.77□□□□□ -0.69
ATG4B-219ENST00000479941 TPSB2P20231 275 aa10.77□□□□□ -0.69
ATG4B-219ENST00000479941 CSRP1P21291 193 aaKnown RBP10.77□□□□□ -0.69
ATG4B-219ENST00000479941 SPAM1P38567 509 aa10.77□□□□□ -0.69
ATG4B-219ENST00000479941 HK3P52790 923 aa10.77□□□□□ -0.69
ATG4B-219ENST00000479941 CDK16Q00536 496 aa10.77□□□□□ -0.69
ATG4B-219ENST00000479941 IL9RQ01113 521 aa10.77□□□□□ -0.69
ATG4B-219ENST00000479941 PPARDQ03181 441 aa10.77□□□□□ -0.69
ATG4B-219ENST00000479941 BNIP3Q12983 259 aa10.77□□□□□ -0.69
ATG4B-219ENST00000479941 GPS1Q13098 491 aa10.77□□□□□ -0.69
ATG4B-219ENST00000479941 PUM1Q14671 1186 aaKnown RBP eCLIP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms