RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 NOP2P46087 812 aaKnown RBP17.26■□□□□ 0.35
HMGN1-212ENST00000479586 CSNK1DP48730 415 aa17.26■□□□□ 0.35
HMGN1-212ENST00000479586 BCL2L1Q07817 233 aa17.26■□□□□ 0.35
HMGN1-212ENST00000479586 MRPL49Q13405 166 aaKnown RBP17.26■□□□□ 0.35
HMGN1-212ENST00000479586 CNGA3Q16281 694 aa17.26■□□□□ 0.35
HMGN1-212ENST00000479586 EIF2S3LQ2VIR3 472 aaKnown RBP17.26■□□□□ 0.35
HMGN1-212ENST00000479586 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.26■□□□□ 0.35
HMGN1-212ENST00000479586 DENND2CQ68D51 928 aa17.26■□□□□ 0.35
HMGN1-212ENST00000479586 NTAN1Q96AB6 310 aa17.26■□□□□ 0.35
HMGN1-212ENST00000479586 OR2M4Q96R27 311 aa17.26■□□□□ 0.35
HMGN1-212ENST00000479586 TRIM55Q9BYV6 548 aa17.26■□□□□ 0.35
HMGN1-212ENST00000479586 SIDT1Q9NXL6 827 aaKnown RBP17.26■□□□□ 0.35
HMGN1-212ENST00000479586 GOLGA6AQ9NYA3 693 aa17.26■□□□□ 0.35
HMGN1-212ENST00000479586 RCOR3Q9P2K3 495 aaPredicted RBP17.26■□□□□ 0.35
HMGN1-212ENST00000479586 WASH4PA8MWX3 477 aa17.25■□□□□ 0.35
HMGN1-212ENST00000479586 TRAFD1O14545 582 aaPredicted RBP17.25■□□□□ 0.35
HMGN1-212ENST00000479586 FGFR1OPO95684 399 aaKnown RBP17.25■□□□□ 0.35
HMGN1-212ENST00000479586 ETV3P41162 512 aa17.25■□□□□ 0.35
HMGN1-212ENST00000479586 MAPK9P45984 424 aa17.25■□□□□ 0.35
HMGN1-212ENST00000479586 POLR2LP62875 67 aaKnown RBP17.25■□□□□ 0.35
HMGN1-212ENST00000479586 PRR30Q53SZ7 412 aaPredicted RBP17.25■□□□□ 0.35
HMGN1-212ENST00000479586 DPY19L2P1Q6NXN4 242 aa17.25■□□□□ 0.35
HMGN1-212ENST00000479586 SLFN11Q7Z7L1 901 aa17.25■□□□□ 0.35
HMGN1-212ENST00000479586 SFRP1Q8N474 314 aa17.25■□□□□ 0.35
HMGN1-212ENST00000479586 GALNT6Q8NCL4 622 aa17.25■□□□□ 0.35
HMGN1-212ENST00000479586 FNIP1Q8TF40 1166 aa17.25■□□□□ 0.35
HMGN1-212ENST00000479586 DTD2Q96FN9 168 aa17.25■□□□□ 0.35
HMGN1-212ENST00000479586 CELF6Q96J87 481 aaKnown RBP17.25■□□□□ 0.35
HMGN1-212ENST00000479586 LRRC19Q9H756 370 aa17.25■□□□□ 0.35
HMGN1-212ENST00000479586 GOLGA6L4A6NEF3 574 aa17.24■□□□□ 0.35
HMGN1-212ENST00000479586 TCP11X1B4DZS4 312 aa17.24■□□□□ 0.35
HMGN1-212ENST00000479586 SORBS2O94875 1100 aaKnown RBP17.24■□□□□ 0.35
HMGN1-212ENST00000479586 NFATC2Q13469 925 aa17.24■□□□□ 0.35
HMGN1-212ENST00000479586 RAET1GQ6H3X3 334 aa17.24■□□□□ 0.35
HMGN1-212ENST00000479586 C6orf15Q6UXA7 325 aaPredicted RBP17.24■□□□□ 0.35
HMGN1-212ENST00000479586 HSD11B1LQ7Z5J1 315 aa17.24■□□□□ 0.35
HMGN1-212ENST00000479586 APLFQ8IW19 511 aaPredicted RBP17.24■□□□□ 0.35
HMGN1-212ENST00000479586 SRRM1Q8IYB3 904 aaKnown RBP17.24■□□□□ 0.35
HMGN1-212ENST00000479586 SCARF2Q96GP6 870 aaPredicted RBP17.24■□□□□ 0.35
HMGN1-212ENST00000479586 TWSG1Q9GZX9 223 aa17.24■□□□□ 0.35
HMGN1-212ENST00000479586 CATSPERBQ9H7T0 1116 aa17.24■□□□□ 0.35
HMGN1-212ENST00000479586 TMEM98Q9Y2Y6 226 aa17.24■□□□□ 0.35
HMGN1-212ENST00000479586 FHOD1Q9Y613 1164 aa17.24■□□□□ 0.35
HMGN1-212ENST00000479586 PALMO75781 387 aa17.23■□□□□ 0.35
HMGN1-212ENST00000479586 HEXIM1O94992 359 aaKnown RBP17.23■□□□□ 0.35
HMGN1-212ENST00000479586 HHEXQ03014 270 aa17.23■□□□□ 0.35
HMGN1-212ENST00000479586 FOXM1Q08050 763 aa17.23■□□□□ 0.35
HMGN1-212ENST00000479586 MARK2Q7KZI7 788 aaKnown RBP17.23■□□□□ 0.35
HMGN1-212ENST00000479586 TRIM74Q86UV6 250 aa17.23■□□□□ 0.35
HMGN1-212ENST00000479586 PRR7Q8TB68 274 aa17.23■□□□□ 0.35
HMGN1-212ENST00000479586 TCTN2Q96GX1 697 aa17.23■□□□□ 0.35
HMGN1-212ENST00000479586 C11orf70Q9BRQ4 267 aa17.23■□□□□ 0.35
HMGN1-212ENST00000479586 CINPQ9BW66 212 aaPredicted RBP17.23■□□□□ 0.35
HMGN1-212ENST00000479586 TTC24A2A3L6 582 aaPredicted RBP17.22■□□□□ 0.35
HMGN1-212ENST00000479586 PIPSLA2A3N6 862 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 CREG1O75629 220 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 LHCGRP22888 699 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 MMP8P22894 467 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 ELAVL4P26378 380 aaKnown RBP17.22■□□□□ 0.35
HMGN1-212ENST00000479586 VIPR1P32241 457 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 PAPOLAP51003 745 aaKnown RBP17.22■□□□□ 0.35
HMGN1-212ENST00000479586 SCNN1BP51168 640 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 RIPPLY3P57055 190 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 SEMA5AQ13591 1074 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 PTPRRQ15256 657 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 PYCR3Q53H96 274 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 Q6ZVL8 140 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 CBARPQ8N350 705 aaPredicted RBP17.22■□□□□ 0.35
HMGN1-212ENST00000479586 EPS8L1Q8TE68 723 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 SLC20A1Q8WUM9 679 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 STAMBPL1Q96FJ0 436 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 PHF12Q96QT6 1004 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 SLC39A8Q9C0K1 460 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 LUZP4Q9P127 313 aa17.22■□□□□ 0.35
HMGN1-212ENST00000479586 ERRFI1Q9UJM3 462 aaPredicted RBP17.22■□□□□ 0.35
HMGN1-212ENST00000479586 INPP4BO15327 924 aa17.21■□□□□ 0.35
HMGN1-212ENST00000479586 KIAA0754O94854 1291 aa17.21■□□□□ 0.35
HMGN1-212ENST00000479586 SOD1P00441 154 aa17.21■□□□□ 0.35
HMGN1-212ENST00000479586 LDLRP01130 860 aa17.21■□□□□ 0.35
HMGN1-212ENST00000479586 TNFAIP3P21580 790 aa17.21■□□□□ 0.35
HMGN1-212ENST00000479586 TEAD1P28347 426 aa17.21■□□□□ 0.35
HMGN1-212ENST00000479586 RFC1P35251 1148 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-212ENST00000479586 PGDP52209 483 aa17.21■□□□□ 0.35
HMGN1-212ENST00000479586 GFERP55789 205 aa17.21■□□□□ 0.35
HMGN1-212ENST00000479586 CHAF1BQ13112 559 aa17.21■□□□□ 0.35
HMGN1-212ENST00000479586 INPP5JQ15735 1006 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-212ENST00000479586 C1QL3Q5VWW1 255 aa17.21■□□□□ 0.35
HMGN1-212ENST00000479586 CPZQ66K79 652 aa17.21■□□□□ 0.35
HMGN1-212ENST00000479586 SCYL2Q6P3W7 929 aa17.21■□□□□ 0.35
HMGN1-212ENST00000479586 RFLNAQ6ZTI6 216 aa17.21■□□□□ 0.35
HMGN1-212ENST00000479586 ELOA2Q8IYF1 753 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-212ENST00000479586 SLC30A5Q8TAD4 765 aa17.21■□□□□ 0.35
HMGN1-212ENST00000479586 SARS2Q9NP81 518 aaKnown RBP17.21■□□□□ 0.35
HMGN1-212ENST00000479586 KCND3Q9UK17 655 aa17.21■□□□□ 0.35
HMGN1-212ENST00000479586 PCYT1BQ9Y5K3 369 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-212ENST00000479586 MN1Q10571 1320 aaPredicted RBP17.21■□□□□ 0.34
HMGN1-212ENST00000479586 APCP25054 2843 aa17.2■□□□□ 0.34
HMGN1-212ENST00000479586 WIPF3A6NGB9 483 aa17.2■□□□□ 0.34
HMGN1-212ENST00000479586 FGF10O15520 208 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-212ENST00000479586 ANKRD34CP0C6C1 535 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms