RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 UMODL1-AS1Q8N2C9 162 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 PYROXD2Q8N2H3 581 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 TP53I13Q8NBR0 393 aaPredicted RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 DENND6BQ8NEG7 585 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 PCDH19Q8TAB3 1148 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 ZNF564Q8TBZ8 553 aaPredicted RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 SCG3Q8WXD2 468 aaKnown RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 ASB12Q8WXK4 309 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 N4BP2L2Q92802 583 aaPredicted RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 ITFG2Q969R8 447 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 IQCDQ96DY2 449 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 HMCESQ96FZ2 354 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 TBATAQ96M53 351 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 GFM1Q96RP9 751 aaKnown RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 BAG1Q99933 345 aaPredicted RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 SH3GL3Q99963 347 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 ARHGAP9Q9BRR9 750 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 CINPQ9BW66 212 aaPredicted RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 SLC12A9Q9BXP2 914 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 CPEB1Q9BZB8 566 aaKnown RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 SLC13A1Q9BZW2 595 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 RAB6CQ9H0N0 254 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 SLC25A18Q9H1K4 315 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 HAUS4Q9H6D7 363 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 ATP13A3Q9H7F0 1226 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 ZWILCHQ9H900 591 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 HAUS2Q9NVX0 235 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 SIRPGQ9P1W8 387 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 SPASTQ9UBP0 616 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 GULP1Q9UBP9 304 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 CNOT8Q9UFF9 292 aaKnown RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 PCSK1NQ9UHG2 260 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 LOXL2Q9Y4K0 774 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 UNC13CQ8NB66 2214 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 CTAGE15A4D2H0 777 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 TMEM110-MUSTN1A8MSY1 372 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 GOLGA8KD6RF30 607 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 DFFAO00273 331 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 EIF3HO15372 352 aaKnown RBP eCLIP6.67□□□□□ -1.345e-6■□□□□ 8.9
VCP-205ENST00000479300 KIF5CO60282 957 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 PPFIA2O75334 1257 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 PALMO75781 387 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 ANXA6P08133 673 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 CCDC175P0C221 793 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 CTAGE8P0CG41 777 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 CTSEP14091 401 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 HTR1BP28222 390 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 SERPINA4P29622 427 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 CCT5P48643 541 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 BLKP51451 505 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 UBASH3AP57075 661 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 YPEL5P62699 121 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 VSNL1P62760 191 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 POLR2LP62875 67 aaKnown RBP6.67□□□□□ -1.34
VCP-205ENST00000479300 BCL2L1Q07817 233 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 EIF3IQ13347 325 aaKnown RBP6.67□□□□□ -1.34
VCP-205ENST00000479300 BIRC2Q13490 618 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 MAMLD1Q13495 774 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 RFTN1Q14699 578 aaPredicted RBP6.67□□□□□ -1.34
VCP-205ENST00000479300 C16orf72Q14CZ0 275 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 HADHQ16836 314 aaKnown RBP6.67□□□□□ -1.34
VCP-205ENST00000479300 MANEAQ5SRI9 462 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 FBXW10Q5XX13 1052 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 PLEKHA7Q6IQ23 1121 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 BRAT1Q6PJG6 821 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 MACC1Q6ZN28 852 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 CTAGE6Q86UF2 777 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 TAX1BP1Q86VP1 789 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 PSTKQ8IV42 348 aaKnown RBP6.67□□□□□ -1.34
VCP-205ENST00000479300 SLITRK4Q8IW52 837 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 CTAGE4Q8IX94 777 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 LZTR1Q8N653 840 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 ARL10Q8N8L6 244 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 WDR48Q8TAF3 677 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 HCAR2Q8TDS4 363 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 JPH3Q8WXH2 748 aaPredicted RBP6.67□□□□□ -1.34
VCP-205ENST00000479300 USP7Q93009 1102 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 TSACCQ96A04 125 aaPredicted RBP6.67□□□□□ -1.34
VCP-205ENST00000479300 ZNF641Q96N77 438 aaPredicted RBP6.67□□□□□ -1.34
VCP-205ENST00000479300 TUBGCP5Q96RT8 1024 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 WRAP53Q9BUR4 548 aaKnown RBP6.67□□□□□ -1.34
VCP-205ENST00000479300 LRRN3Q9H3W5 708 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 SUV39H2Q9H5I1 410 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 BATF3Q9NR55 127 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 NDFIP2Q9NV92 336 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 GPATCH2LQ9NWQ4 482 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 AIPL1Q9NZN9 384 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 DKK3Q9UBP4 350 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 MFHAS1Q9Y4C4 1052 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 ICE1Q9Y2F5 2266 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 CHD5Q8TDI0 1954 aa6.67□□□□□ -1.34
VCP-205ENST00000479300 A0A1B0GTH6 734 aa6.66□□□□□ -1.34
VCP-205ENST00000479300 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.66□□□□□ -1.34
VCP-205ENST00000479300 A0A1W2PQ67 120 aa6.66□□□□□ -1.34
VCP-205ENST00000479300 BLACEA4D250 179 aa6.66□□□□□ -1.34
VCP-205ENST00000479300 CTAGE9A4FU28 777 aa6.66□□□□□ -1.34
VCP-205ENST00000479300 TMEM191CA6NGB0 347 aa6.66□□□□□ -1.34
VCP-205ENST00000479300 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.66□□□□□ -1.34
VCP-205ENST00000479300 PRAMEF11O60813 436 aa6.66□□□□□ -1.34
VCP-205ENST00000479300 MMP20O60882 483 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms