RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ENPP7Q6UWV6 458 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 RD3Q7Z3Z2 195 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 TECPR1Q7Z6L1 1165 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 TRIM74Q86UV6 250 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 HID1Q8IV36 788 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 RBFAQ8N0V3 343 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 PDCD7Q8N8D1 485 aaKnown RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 PRELID2Q8N945 189 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 TSACCQ96A04 125 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 FUBP1Q96AE4 644 aaKnown RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 EID2BQ96D98 161 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 PDXPQ96GD0 296 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 PPP1R2P1Q96PQ5 205 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 RIOK2Q9BVS4 552 aaKnown RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 LGR4Q9BXB1 951 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 SPATA16Q9BXB7 569 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 ABCG8Q9H221 673 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 TCEAL2Q9H3H9 227 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 LRRC40Q9H9A6 602 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 ERVMER34-1Q9H9K5 563 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 MAGEE1Q9HCI5 957 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 RAB6BQ9NRW1 208 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 PHPT1Q9NRX4 125 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 GPR27Q9NS67 375 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 UCKL1Q9NWZ5 548 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 DLL3Q9NYJ7 618 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 KLQ9UEF7 1012 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 APOBEC3BQ9UH17 382 aaKnown RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 KLF15Q9UIH9 416 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 PNMA8BQ9ULN7 279 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 BTBD3Q9Y2F9 522 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 ARL5AQ9Y689 179 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 TMEM202A6NGA9 273 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 H3BM21 787 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 GIPC1O14908 333 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 YKT6O15498 198 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 FLRT2O43155 660 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 EPOP01588 193 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 ZNF883P0CG24 379 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 MYCLP1P12525 358 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-215ENST00000478531 TCP1P17987 556 aaKnown RBP6.87□□□□□ -1.31
BRCA1-215ENST00000478531 ADRA1AP35348 466 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 BASP1P80723 227 aaKnown RBP6.87□□□□□ -1.31
BRCA1-215ENST00000478531 CDK3Q00526 305 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 PPARDQ03181 441 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 EIF2B5Q13144 721 aaKnown RBP6.87□□□□□ -1.31
BRCA1-215ENST00000478531 SLC14A1Q13336 389 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 SEPT6Q14141 434 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 PUM1Q14671 1186 aaKnown RBP eCLIP6.87□□□□□ -1.31
BRCA1-215ENST00000478531 SUZ12Q15022 739 aaKnown RBP6.87□□□□□ -1.31
BRCA1-215ENST00000478531 INAVAQ3KP66 663 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 PRRT3Q5FWE3 981 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 KCTD16Q68DU8 428 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 TTC27Q6P3X3 843 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 DRICH1Q6PGQ1 229 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-215ENST00000478531 DGLUCYQ7Z3D6 616 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 PHACTR4Q8IZ21 702 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 CBARPQ8N350 705 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-215ENST00000478531 ZNF548Q8NEK5 533 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-215ENST00000478531 ACTRT1Q8TDG2 376 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 RHBDD1Q8TEB9 315 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 SAP25Q8TEE9 199 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 MAGOHBQ96A72 148 aaKnown RBP6.87□□□□□ -1.31
BRCA1-215ENST00000478531 WDR92Q96MX6 357 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 AGAP2Q99490 1192 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 SLC13A1Q9BZW2 595 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 FAM83DQ9H4H8 585 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 ETNK1Q9HBU6 452 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 FGF22Q9HCT0 170 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 MRPL40Q9NQ50 206 aaKnown RBP6.87□□□□□ -1.31
BRCA1-215ENST00000478531 HOMER3Q9NSC5 361 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 KCTD5Q9NXV2 234 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 PAK5Q9P286 719 aa6.87□□□□□ -1.31
BRCA1-215ENST00000478531 CES2O00748 559 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 TOR1BO14657 336 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 FANCGO15287 622 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 PCDHGA12O60330 932 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 PIAS2O75928 621 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 AP2A1O95782 977 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 SOD1P00441 154 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 CSF2P04141 144 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 APRTP07741 180 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 NME1P15531 152 aaKnown RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 TPH1P17752 444 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 DGKAP23743 735 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 RPL22P35268 128 aaKnown RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 TRIM23P36406 574 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 FDFT1P37268 417 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 GRK6P43250 576 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 RXRGP48443 463 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 KIAA1024LP59773 190 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 SRP54P61011 504 aaKnown RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 HNRNPKP61978 463 aaKnown RBP eCLIP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 DPTQ07507 201 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 C1orf61Q13536 156 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 ALG11Q2TAA5 492 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 PPM1JQ5JR12 505 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 HENMT1Q5T8I9 393 aaKnown RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 KCTD11Q693B1 232 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 CCDC137Q6PK04 289 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms