RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	SPIDR	Q14159	915 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	QPCT	Q16769	361 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	C19orf48	Q6RUI8	117 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	DAAM2	Q86T65	1068 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	CCDC50	Q8IVM0	306 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	KATNAL2	Q8IYT4	538 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	LSMEM2	Q8N112	164 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	EXD1	Q8NHP7	514 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	CCL4L1	Q8NHW4	92 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	KIAA1524	Q8TCG1	905 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	GPBAR1	Q8TDU6	330 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	TFB1M	Q8WVM0	346 aa	Known RBP	13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	P3H4	Q92791	437 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	FGF11	Q92914	225 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	CCDC74A	Q96AQ1	378 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	RBM41	Q96IZ5	413 aa	Known RBP	13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	HIC2	Q96JB3	615 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	CALR3	Q96L12	384 aa	Known RBP	13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	DCBLD2	Q96PD2	775 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	GSDMC	Q9BYG8	508 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	CEP41	Q9BYV8	373 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	SLC25A51	Q9H1U9	297 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	SYNDIG1	Q9H7V2	258 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	POLR1B	Q9H9Y6	1135 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	PKD2L2	Q9NZM6	624 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	SAE1	Q9UBE0	346 aa	Predicted RBP	13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	SUFU	Q9UMX1	484 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	LHX6	Q9UPM6	363 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	SLC17A4	Q9Y2C5	497 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	CFAP47	Q6ZTR5	3102 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937		B4DGG1	531 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	NTN3	O00634	580 aa	Predicted RBP	13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	RRP8	O43159	456 aa	Known RBP	13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	MTSS1	O43312	755 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	MPO	P05164	745 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	PNLIP	P16233	465 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	GLB1	P16278	677 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	FECH	P22830	423 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	LSS	P48449	732 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	POLD2	P49005	469 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	SPINT3	P49223	89 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	GABRE	P78334	506 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	PEX6	Q13608	980 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	LLGL1	Q15334	1064 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	SLC14A2	Q15849	920 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	TBC1D25	Q3MII6	688 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	C14orf28	Q4W4Y0	310 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	CCDC70	Q6NSX1	233 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	DOK6	Q6PKX4	331 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	LRRC69	Q6ZNQ3	347 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	B4GALNT4	Q76KP1	1039 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	KDELC2	Q7Z4H8	507 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	GFM1	Q96RP9	751 aa	Known RBP	13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	RIOK2	Q9BVS4	552 aa	Known RBP	13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	GLOD4	Q9HC38	313 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	RABGEF1	Q9UJ41	708 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	APPL1	Q9UKG1	709 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	ENTPD2	Q9Y5L3	495 aa		13.74	□□□□□ -0.21
HDAC7-222	ENST00000477937	hCG_1818297	A0A087WSY0	165 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	RGSL1	A5PLK6	1076 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	TLX3	O43711	291 aa	Predicted RBP	13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	NOBOX	O60393	691 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	PECAM1	P16284	738 aa	Predicted RBP	13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	PTPN3	P26045	913 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	EIF2S3	P41091	472 aa	Known RBP	13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	NAP1L1	P55209	391 aa	Known RBP	13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	CCL7	P80098	99 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	CDK18	Q07002	472 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	GALNT3	Q14435	633 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	PRKD1	Q15139	912 aa	Predicted RBP	13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	PCSK7	Q16549	785 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	COL28A1	Q2UY09	1125 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	FAM182A	Q5T1J6	154 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	CERCAM	Q5T4B2	595 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	ZC3H18	Q86VM9	953 aa	Known RBP	13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	GAS2L3	Q86XJ1	694 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	NRROS	Q86YC3	692 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	SPATA22	Q8NHS9	363 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	SNIP1	Q8TAD8	396 aa	Known RBP	13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	TADA1	Q96BN2	335 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	SCARF2	Q96GP6	870 aa	Predicted RBP	13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	ATXN7L3B	Q96GX2	97 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	TEKT5	Q96M29	485 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	ZNF578	Q96N58	590 aa	Predicted RBP	13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	AGAP2	Q99490	1192 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	CDH19	Q9H159	772 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	FAM83D	Q9H4H8	585 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	ZFYVE1	Q9HBF4	777 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	MAGEE1	Q9HCI5	957 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	LRIT1	Q9P2V4	623 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	RALY	Q9UKM9	306 aa	Known RBP	13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	TMEM98	Q9Y2Y6	226 aa		13.73	□□□□□ -0.21
HDAC7-222	ENST00000477937	CASC3	O15234	703 aa	Known RBP	13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	INPP4B	O15327	924 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	NUDT21	O43809	227 aa	Known RBP	13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	DXO	O77932	396 aa	Known RBP	13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	ASMTL	O95671	621 aa		13.72	□□□□□ -0.21

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