RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 SAE1Q9UBE0 346 aaPredicted RBP21.68■■□□□ 1.06
COL9A3-211ENST00000477612 PCDHA3Q9Y5H8 950 aa21.68■■□□□ 1.06
COL9A3-211ENST00000477612 KIF26BQ2KJY2 2108 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 SCN8AQ9UQD0 1980 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 TCEA3O75764 348 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 IPO7O95373 1038 aaKnown RBP21.67■■□□□ 1.06
COL9A3-211ENST00000477612 IVLP07476 585 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 PTPN3P26045 913 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 CDC25BP30305 580 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 CTNNA1P35221 906 aaKnown RBP21.67■■□□□ 1.06
COL9A3-211ENST00000477612 COPS2P61201 443 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 KAZNQ674X7 775 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 TAF8Q7Z7C8 310 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 TMEM139Q8IV31 216 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 KYQ8NBH2 561 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 P3H4Q92791 437 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 SCAMP4Q969E2 229 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 COX14Q96I36 57 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 WDR24Q96S15 920 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 GLOD4Q9HC38 313 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 IMPACTQ9P2X3 320 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 GULP1Q9UBP9 304 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 CD84Q9UIB8 345 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 EFR3BQ9Y2G0 817 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 DUSP10Q9Y6W6 482 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 CHD6Q8TD26 2715 aa21.67■■□□□ 1.06
COL9A3-211ENST00000477612 NTN3O00634 580 aaPredicted RBP21.66■■□□□ 1.06
COL9A3-211ENST00000477612 MTSS1O43312 755 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 NOBOXO60393 691 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 SPINT3P49223 89 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 VAV2P52735 878 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 WASHC5Q12768 1159 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 ISXQ2M1V0 245 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 BBS12Q6ZW61 710 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 NRROSQ86YC3 692 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 CCL4L1Q8NHW4 92 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 AGAP2Q99490 1192 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 CCDC3Q9BQI4 270 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 LACRTQ9GZZ8 138 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 CARS2Q9HA77 564 aaKnown RBP21.66■■□□□ 1.06
COL9A3-211ENST00000477612 MAGEE1Q9HCI5 957 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 SEPT10Q9P0V9 454 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 SUFUQ9UMX1 484 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 PCDHB1Q9Y5F3 818 aa21.66■■□□□ 1.06
COL9A3-211ENST00000477612 C1orf232A0A0U1RR37 186 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 HACD1B0YJ81 288 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 CSO75390 466 aaKnown RBP21.65■■□□□ 1.06
COL9A3-211ENST00000477612 PNLIPP16233 465 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 CD68P34810 354 aaPredicted RBP21.65■■□□□ 1.06
COL9A3-211ENST00000477612 CDK18Q07002 472 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 LLGL1Q15334 1064 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 FAM182AQ5T1J6 154 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 HENMT1Q5T8I9 393 aaKnown RBP21.65■■□□□ 1.06
COL9A3-211ENST00000477612 B4GALNT4Q76KP1 1039 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 C17orf82Q86X59 251 aaPredicted RBP21.65■■□□□ 1.06
COL9A3-211ENST00000477612 FAM46DQ8NEK8 389 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 CCHCR1Q8TD31 782 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 VAT1Q99536 393 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 BAG1Q99933 345 aaPredicted RBP21.65■■□□□ 1.06
COL9A3-211ENST00000477612 RIOK2Q9BVS4 552 aaKnown RBP21.65■■□□□ 1.06
COL9A3-211ENST00000477612 SIRPGQ9P1W8 387 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 MOSPD1Q9UJG1 213 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 APPL1Q9UKG1 709 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 RAXQ9Y2V3 346 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 GPSM3Q9Y4H4 160 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 AK5Q9Y6K8 562 aa21.65■■□□□ 1.06
COL9A3-211ENST00000477612 A0A087WV48 116 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 GOLGA6CA6NDK9 693 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 GOLGA6BA6NDN3 693 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 APOC4-APOC2K7ER74 178 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 MT-CYBP00156 380 aaPredicted RBP21.64■■□□□ 1.05
COL9A3-211ENST00000477612 APOC2P02655 101 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 GOLGA6DP0CG33 693 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 GLB1P16278 677 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 CTNNA2P26232 953 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 PTPN7P35236 360 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 XRCC4Q13426 336 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 HLTFQ14527 1009 aaKnown RBP eCLIP21.64■■□□□ 1.05
COL9A3-211ENST00000477612 TCEA2Q15560 299 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 RBM44Q6ZP01 1051 aaKnown RBP21.64■■□□□ 1.05
COL9A3-211ENST00000477612 TMC3Q7Z5M5 1100 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 LRRC57Q8N9N7 239 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 ACRBPQ8NEB7 543 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 SPATA22Q8NHS9 363 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 KIAA1524Q8TCG1 905 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 PTCD2Q8WV60 388 aaKnown RBP21.64■■□□□ 1.05
COL9A3-211ENST00000477612 EID2BQ96D98 161 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 HIC2Q96JB3 615 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 GSDMCQ9BYG8 508 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 GOLGA6AQ9NYA3 693 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 PKD2L2Q9NZM6 624 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 NFKBIL1Q9UBC1 381 aaPredicted RBP21.64■■□□□ 1.05
COL9A3-211ENST00000477612 RABGEF1Q9UJ41 708 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 CNOT6Q9ULM6 557 aaKnown RBP21.64■■□□□ 1.05
COL9A3-211ENST00000477612 ENTPD2Q9Y5L3 495 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 ST14Q9Y5Y6 855 aa21.64■■□□□ 1.05
COL9A3-211ENST00000477612 CCDC66A2RUB6 948 aa21.63■■□□□ 1.05
COL9A3-211ENST00000477612 DXOO77932 396 aaKnown RBP21.63■■□□□ 1.05
COL9A3-211ENST00000477612 POLD2P49005 469 aa21.63■■□□□ 1.05
COL9A3-211ENST00000477612 GALNT3Q14435 633 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms