RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SH3TC1Q8TE82 1336 aa4.21□□□□□ -1.74
UBR3-209ENST00000477461 IBTKQ9P2D0 1353 aaPredicted RBP4.2□□□□□ -1.74
UBR3-209ENST00000477461 SAA2-SAA4A0A096LPE2 208 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 DHX16O60231 1041 aaKnown RBP4.2□□□□□ -1.74
UBR3-209ENST00000477461 HMMRO75330 724 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 SERPINB2P05120 415 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 MMP10P09238 476 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 RXRAP19793 462 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 PPM1FP49593 454 aaPredicted RBP4.2□□□□□ -1.74
UBR3-209ENST00000477461 VAMP2P63027 116 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 TLE2Q04725 743 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 ACSM2AQ08AH3 577 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 AP5B1Q2VPB7 878 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 SUSD4Q5VX71 490 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 RHBDF2Q6PJF5 856 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 MEX3BQ6ZN04 569 aaKnown RBP4.2□□□□□ -1.74
UBR3-209ENST00000477461 CNBD1Q8NA66 436 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 POC1AQ8NBT0 407 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 CEP70Q8NHQ1 597 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 PPM1EQ8WY54 764 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 NCSTNQ92542 709 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 UBXN10Q96LJ8 280 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 COG8Q96MW5 612 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 EPYCQ99645 322 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 USP44Q9H0E7 712 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 CXorf56Q9H5V9 222 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 GAREM1Q9H706 876 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 RIC8AQ9NPQ8 531 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 FBXO40Q9UH90 709 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 DHDHQ9UQ10 334 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 LRRFIP2Q9Y608 721 aaKnown RBP4.2□□□□□ -1.74
UBR3-209ENST00000477461 COL24A1Q17RW2 1714 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 UBN2Q6ZU65 1347 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 CDHR2Q9BYE9 1310 aa4.2□□□□□ -1.74
UBR3-209ENST00000477461 DYTNA2CJ06 578 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 VWA3AA6NCI4 1184 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 PRR23AA6NEV1 266 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 EIF3FO00303 357 aaPredicted RBP4.19□□□□□ -1.74
UBR3-209ENST00000477461 CLGNO14967 610 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 STRNO43815 780 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 LMX1BO60663 402 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 KRT36O76013 467 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 DAOP14920 347 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 UBE3AQ05086 875 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 CHRNDQ07001 517 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 TBL3Q12788 808 aaKnown RBP4.19□□□□□ -1.74
UBR3-209ENST00000477461 RUNDC3AQ59EK9 446 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 XKR9Q5GH70 373 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 DSTYKQ6XUX3 929 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 ZNF771Q7L3S4 317 aaPredicted RBP4.19□□□□□ -1.74
UBR3-209ENST00000477461 LRRTM4Q86VH4 590 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 RPAP2Q8IXW5 612 aaPredicted RBP4.19□□□□□ -1.74
UBR3-209ENST00000477461 RBFAQ8N0V3 343 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 RFLNBQ8N5W9 214 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 ANKRD44Q8N8A2 993 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 RASSF8Q8NHQ8 419 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 TMEM163Q8TC26 289 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 TMEM255BQ8WV15 326 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 USP13Q92995 863 aaPredicted RBP4.19□□□□□ -1.74
UBR3-209ENST00000477461 TEFMQ96QE5 360 aaKnown RBP4.19□□□□□ -1.74
UBR3-209ENST00000477461 REEP2Q9BRK0 252 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 RWDD1Q9H446 243 aaPredicted RBP4.19□□□□□ -1.74
UBR3-209ENST00000477461 BICC1Q9H694 974 aaKnown RBP4.19□□□□□ -1.74
UBR3-209ENST00000477461 TMEM160Q9NX00 188 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 NLKQ9UBE8 527 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 GDAQ9Y2T3 454 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 LAMB2P55268 1798 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 UTYO14607 1347 aa4.19□□□□□ -1.74
UBR3-209ENST00000477461 CASZ1Q86V15 1759 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 IGLV5-37A0A075B6J1 123 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 ANKRD18BA2A2Z9 1011 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 C17orf100A8MU93 164 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 PRAC2D3DTV9 90 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 BMPR1BO00238 502 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 NTN3O00634 580 aaPredicted RBP4.18□□□□□ -1.74
UBR3-209ENST00000477461 MMP3P08254 477 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 TM4SF1P30408 202 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 RPL3P39023 403 aaKnown RBP4.18□□□□□ -1.74
UBR3-209ENST00000477461 PTPN9P43378 593 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 MTNR1AP48039 350 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 ARHGAP8P85298 464 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 GOLGA8FQ08AF8 430 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 SNTA1Q13424 505 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 BYSLQ13895 437 aaKnown RBP4.18□□□□□ -1.74
UBR3-209ENST00000477461 CAPSQ13938 189 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 ZRSR1Q15695 479 aaKnown RBP4.18□□□□□ -1.74
UBR3-209ENST00000477461 TAF12Q16514 161 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 CCDC57Q2TAC2 916 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 CCDC152Q4G0S7 254 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 WDR45BQ5MNZ6 344 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 PRR5LQ6MZQ0 368 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 GJB7Q6PEY0 223 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 CPOQ8IVL8 374 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 RBM17Q96I25 401 aaKnown RBP4.18□□□□□ -1.74
UBR3-209ENST00000477461 IL17FQ96PD4 163 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 MSTO1Q9BUK6 570 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 NPLQ9BXD5 320 aaPredicted RBP4.18□□□□□ -1.74
UBR3-209ENST00000477461 SPRY4Q9C004 299 aa4.18□□□□□ -1.74
UBR3-209ENST00000477461 CLK4Q9HAZ1 481 aaKnown RBP4.18□□□□□ -1.74
UBR3-209ENST00000477461 TLR8Q9NR97 1041 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms